RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 UBA1P22314 1058 aaKnown RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 CDK7P50613 346 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 GRM2Q14416 872 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 TTLL4Q14679 1199 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 CEP55Q53EZ4 464 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 EARS2Q5JPH6 523 aaKnown RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 ARHGEF16Q5VV41 709 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 PPP4R3AQ6IN85 833 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 WFDC3Q8IUB2 231 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 CCDC83Q8IWF9 413 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 BLIDQ8IZY5 108 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 PPTC7Q8NI37 304 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 PIBF1Q8WXW3 757 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 MPHOSPH6Q99547 160 aaKnown RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 MXRA8Q9BRK3 442 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 ALG1Q9BT22 464 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 WDR11Q9BZH6 1224 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 NIF3L1Q9GZT8 377 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 CCDC86Q9H6F5 360 aaKnown RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 CWC22Q9HCG8 908 aaKnown RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 KCNMB3Q9NPA1 279 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 XPNPEP3Q9NQH7 507 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 KRT82Q9NSB4 513 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 MORC2Q9Y6X9 1032 aaPredicted RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 GRIN2DO15399 1336 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 ELP1O95163 1332 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 EVPLQ92817 2033 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 TET1Q8NFU7 2136 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 ZNF862O60290 1169 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 ATP9AO75110 1047 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 F2P00734 622 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 PTGS1P23219 599 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 PURAQ00577 322 aaKnown RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 AKAP17AQ02040 695 aaKnown RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 ITGB3BPQ13352 177 aaPredicted RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 ORC2Q13416 577 aaPredicted RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 Q4G0T1 1027 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 CELF3Q5SZQ8 465 aaKnown RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 KRT40Q6A162 431 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 METTL7BQ6UX53 244 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 ANKRD33Q7Z3H0 272 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 TLK2Q86UE8 772 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 SESTD1Q86VW0 696 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 ARRDC4Q8NCT1 418 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 CYP2W1Q8TAV3 490 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 ETNPPLQ8TBG4 499 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 DIS3LQ8TF46 1054 aaKnown RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 KAT2BQ92831 832 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 CDHR1Q96JP9 859 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 CTAGE1Q96RT6 745 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 SEZ6LQ9BYH1 1024 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 FOXP1Q9H334 677 aaPredicted RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 BCAS3Q9H6U6 928 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 KCNH7Q9NS40 1196 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 TMEM260Q9NX78 707 aa6.52□□□□□ -1.37
VPS36-202ENST00000462289 LAMA2P24043 3122 aaKnown RBP6.52□□□□□ -1.37
VPS36-202ENST00000462289 TRIOBPQ9H2D6 2365 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 BTBD18B2RXH4 712 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 TBX3O15119 743 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 KPNA6O60684 536 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 GADD45BO75293 160 aaPredicted RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 PPFIA4O75335 1185 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 PSMD10O75832 226 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 CABYRO75952 493 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 PGK1P00558 417 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 GH1P01241 217 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 MMP3P08254 477 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 GSTP1P09211 210 aaKnown RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 TXNP10599 105 aaKnown RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 GCFC2P16383 781 aaKnown RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 XBP1P17861 261 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 LIG1P18858 919 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 DDIT3P35638 169 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 TRAPPC10P48553 1259 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 ACLYP53396 1101 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 SOX10P56693 466 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 ADAM17P78536 824 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 SETQ01105 290 aaPredicted RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 ID3Q02535 119 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 RBL2Q08999 1139 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 FSCN1Q16658 493 aaKnown RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 HSDL1Q3SXM5 330 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 GNPTABQ3T906 1256 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 GJC2Q5T442 439 aaPredicted RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 PDZD3Q86UT5 571 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 DIS3L2Q8IYB7 885 aaKnown RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 PCSK9Q8NBP7 692 aaKnown RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 FLCNQ8NFG4 579 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 RASGRP4Q8TDF6 673 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 EPS8L3Q8TE67 593 aaKnown RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 BCL7CQ8WUZ0 217 aaPredicted RBP6.51□□□□□ -1.37
VPS36-202ENST00000462289 SLC5A5Q92911 643 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 TOX2Q96NM4 488 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 FANCD2OSQ96PS1 177 aa6.51□□□□□ -1.37
VPS36-202ENST00000462289 C16orf70Q9BSU1 422 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms