RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 EMILIN2Q9BXX0 1053 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 PDZD7Q9H5P4 517 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 DZANK1Q9NVP4 752 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 PARP2Q9UGN5 583 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 DNM3Q9UQ16 869 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 ZMYM2Q9UBW7 1377 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 PP2D1A8MPX8 630 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 H3BQV1 296 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 N4BP3O15049 544 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 NR1I2O75469 434 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 EFEMP2O95967 443 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 SOD2P04179 222 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 PRKCBP05771 671 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 CDC25AP30304 524 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 IFT74Q96LB3 600 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 KLHL5Q96PQ7 755 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 HERC2P3Q9BVR0 1158 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 MRPL17Q9NRX2 175 aaKnown RBP20.92■□□□□ 0.94
VARS-220ENST00000461874 KLK14Q9P0G3 267 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 CDH22Q9UJ99 828 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 HCN4Q9Y3Q4 1203 aa20.92■□□□□ 0.94
VARS-220ENST00000461874 CNPP09543 421 aaKnown RBP20.91■□□□□ 0.94
VARS-220ENST00000461874 EFNA5P52803 228 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 ATP2C1P98194 919 aaPredicted RBP20.91■□□□□ 0.94
VARS-220ENST00000461874 GRIK3Q13003 919 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 TMEM132AQ24JP5 1023 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 TAS1R1Q7RTX1 841 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 RNF168Q8IYW5 571 aaPredicted RBP20.91■□□□□ 0.94
VARS-220ENST00000461874 C12orf76Q8N812 135 aaPredicted RBP20.91■□□□□ 0.94
VARS-220ENST00000461874 EDAQ92838 391 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 NECTIN4Q96NY8 510 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 MMTAG2Q9BU76 263 aaKnown RBP20.91■□□□□ 0.94
VARS-220ENST00000461874 KIFC3Q9BVG8 833 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 COLEC11Q9BWP8 271 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 USP20Q9Y2K6 914 aa20.91■□□□□ 0.94
VARS-220ENST00000461874 TRIOO75962 3097 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 E9PMD0 336 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 F8W810 466 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 EDN1P05305 212 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 LIG1P18858 919 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 KLRC2P26717 231 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 RARS2Q5T160 578 aaKnown RBP20.9■□□□□ 0.94
VARS-220ENST00000461874 SMC3Q9UQE7 1217 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 SSX2IPQ9Y2D8 614 aa20.9■□□□□ 0.94
VARS-220ENST00000461874 ARIH1Q9Y4X5 557 aaPredicted RBP20.9■□□□□ 0.94
VARS-220ENST00000461874 URODP06132 367 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 MTHFRP42898 656 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 CLCN4P51793 760 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 KIAA0319Q5VV43 1072 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 EEF1DP3Q658K8 133 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 KANK3Q6NY19 840 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 KCNK18Q7Z418 384 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 CABP7Q86V35 215 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 FBXL18Q96ME1 805 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 RIPOR3Q96MK2 946 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 RPS6KC1Q96S38 1066 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 ADPGKQ9BRR6 497 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 POMKQ9H5K3 350 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 SNTG2Q9NY99 539 aa20.89■□□□□ 0.93
VARS-220ENST00000461874 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.89■□□□□ 0.93
VARS-220ENST00000461874 C2CD2LO14523 706 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 WEE2P0C1S8 567 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 GLUD2P49448 558 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 ATAT1Q5SQI0 421 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 NT5DC1Q5TFE4 455 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 RINT1Q6NUQ1 792 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 DAW1Q8N136 415 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 DAXXQ9UER7 740 aaPredicted RBP20.88■□□□□ 0.93
VARS-220ENST00000461874 NR2E1Q9Y466 385 aa20.88■□□□□ 0.93
VARS-220ENST00000461874 TECTAO75443 2155 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 K7ERI5 159 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 HIP1RO75146 1068 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 RECQL4O94761 1208 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 NPTX2P47972 431 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 PEX3P56589 373 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 ZXDAP98168 799 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 DSG1Q02413 1049 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 TUSC3Q13454 348 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 HYIQ5T013 277 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 LARP1BQ659C4 914 aaKnown RBP20.87■□□□□ 0.93
VARS-220ENST00000461874 ARL6IP4Q66PJ3 421 aaKnown RBP20.87■□□□□ 0.93
VARS-220ENST00000461874 KIAA1841Q6NSI8 718 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 C1orf186Q6ZWK4 172 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 RUSC1Q9BVN2 902 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 GPR62Q9BZJ7 368 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 SFXN1Q9H9B4 322 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 RXFP1Q9HBX9 757 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 CHST7Q9NS84 486 aa20.87■□□□□ 0.93
VARS-220ENST00000461874 VWA3AA6NCI4 1184 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 CCDC169A6NNP5 214 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 PTGESO14684 152 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 TEX28O15482 410 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 ADH1AP07327 375 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 SP100P23497 879 aaPredicted RBP20.86■□□□□ 0.93
VARS-220ENST00000461874 ZRSR1Q15695 479 aaKnown RBP20.86■□□□□ 0.93
VARS-220ENST00000461874 DCAF4L1Q3SXM0 396 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 ATF7IP2Q5U623 682 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 FUT10Q6P4F1 479 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 TMC5Q6UXY8 1006 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms