RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 KIAA1024Q9UPX6 916 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 MYO10Q9HD67 2058 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 PDCD11Q14690 1871 aaKnown RBP15.42■□□□□ 0.06
USP4-206ENST00000461553 SOD2P04179 222 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 LIG1P18858 919 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 GJB2P29033 226 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 PRPHP41219 470 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 ITIH3Q06033 890 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 DSC1Q08554 894 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 GRIK3Q13003 919 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 PRPF4BQ13523 1007 aaKnown RBP15.41■□□□□ 0.06
USP4-206ENST00000461553 PDIA5Q14554 519 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 FAM187BQ17R55 369 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 KIFAP3Q92845 792 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 S1PR5Q9H228 398 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 MRPL17Q9NRX2 175 aaKnown RBP15.41■□□□□ 0.06
USP4-206ENST00000461553 PARP2Q9UGN5 583 aa15.41■□□□□ 0.06
USP4-206ENST00000461553 CD2BP2O95400 341 aaKnown RBP15.4■□□□□ 0.06
USP4-206ENST00000461553 EPCAMP16422 314 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 AKAP5P24588 427 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 ECM1Q16610 540 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 RARS2Q5T160 578 aaKnown RBP15.4■□□□□ 0.06
USP4-206ENST00000461553 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 RIPOR3Q96MK2 946 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 TBC1D32Q96NH3 1257 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 FZD8Q9H461 694 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 PDZD7Q9H5P4 517 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
USP4-206ENST00000461553 SMC3Q9UQE7 1217 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 SSX2IPQ9Y2D8 614 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 VWA8A3KMH1 1905 aa15.4■□□□□ 0.06
USP4-206ENST00000461553 ZDBF2Q9HCK1 2354 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 SP100P23497 879 aaPredicted RBP15.39■□□□□ 0.05
USP4-206ENST00000461553 MTHFRP42898 656 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 GLUD2P49448 558 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 EFNA5P52803 228 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 DCAF4L1Q3SXM0 396 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 CABP7Q86V35 215 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 KIFC3Q9BVG8 833 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 ADAM7Q9H2U9 754 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 SFXN1Q9H9B4 322 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 KLK14Q9P0G3 267 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 DNM3Q9UQ16 869 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.39■□□□□ 0.05
USP4-206ENST00000461553 PHLPP2Q6ZVD8 1323 aa15.39■□□□□ 0.05
USP4-206ENST00000461553 KMT2EQ8IZD2 1858 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 PP2D1A8MPX8 630 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 ACKR2O00590 384 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 C2CD2LO14523 706 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 ADH1AP07327 375 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 KLRC2P26717 231 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 ATP2C1P98194 919 aaPredicted RBP15.38■□□□□ 0.05
USP4-206ENST00000461553 DMP1Q13316 513 aaPredicted RBP15.38■□□□□ 0.05
USP4-206ENST00000461553 KIAA1841Q6NSI8 718 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 ELMSAN1Q6PJG2 1045 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
USP4-206ENST00000461553 KLHL5Q96PQ7 755 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 COLEC11Q9BWP8 271 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 POMKQ9H5K3 350 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 MIOSQ9NXC5 875 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 CDH22Q9UJ99 828 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 MYH15Q9Y2K3 1946 aa15.38■□□□□ 0.05
USP4-206ENST00000461553 E9PMD0 336 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 RECQL4O94761 1208 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 CNPP09543 421 aaKnown RBP15.37■□□□□ 0.05
USP4-206ENST00000461553 PLA2G5P39877 138 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 CLCN4P51793 760 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 ZRSR1Q15695 479 aaKnown RBP15.37■□□□□ 0.05
USP4-206ENST00000461553 FUT10Q6P4F1 479 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 RNF168Q8IYW5 571 aaPredicted RBP15.37■□□□□ 0.05
USP4-206ENST00000461553 GSTCDQ8NEC7 633 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 SLC22A17Q8WUG5 538 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 FAM122AQ96E09 287 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 CDK5RAP3Q96JB5 506 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 DRC1Q96MC2 740 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 FBXL18Q96ME1 805 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 SNTG2Q9NY99 539 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
USP4-206ENST00000461553 ADAM28Q9UKQ2 775 aa15.37■□□□□ 0.05
USP4-206ENST00000461553 DOCK8Q8NF50 2099 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 VWA3AA6NCI4 1184 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 TTLL13PA6NNM8 815 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 CCDC169A6NNP5 214 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 F8W810 466 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 HIP1RO75146 1068 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 EDN1P05305 212 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 CDC25AP30304 524 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 PEX3P56589 373 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 TUSC3Q13454 348 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 HSP90AA2PQ14568 343 aaPredicted RBP15.36■□□□□ 0.05
USP4-206ENST00000461553 ATAT1Q5SQI0 421 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 ATF7IP2Q5U623 682 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 C12orf76Q8N812 135 aaPredicted RBP15.36■□□□□ 0.05
USP4-206ENST00000461553 TDRD5Q8NAT2 981 aaKnown RBP15.36■□□□□ 0.05
USP4-206ENST00000461553 EDAQ92838 391 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms