RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 CNNM3Q8NE01 707 aa8.97□□□□□ -0.97
SND1-202ENST00000461056 ZNF507Q8TCN5 953 aa8.97□□□□□ -0.97
SND1-202ENST00000461056 CLP1Q92989 425 aaKnown RBP8.97□□□□□ -0.97
SND1-202ENST00000461056 ZBTB45Q96K62 511 aaPredicted RBP8.97□□□□□ -0.97
SND1-202ENST00000461056 CASD1Q96PB1 797 aa8.97□□□□□ -0.97
SND1-202ENST00000461056 RAD9AQ99638 391 aa8.97□□□□□ -0.97
SND1-202ENST00000461056 MTIF3Q9H2K0 278 aaKnown RBP8.97□□□□□ -0.97
SND1-202ENST00000461056 TTYH1Q9H313 450 aaPredicted RBP8.97□□□□□ -0.97
SND1-202ENST00000461056 KCNG1Q9UIX4 513 aa8.97□□□□□ -0.97
SND1-202ENST00000461056 IPPQ9Y573 584 aa8.97□□□□□ -0.97
SND1-202ENST00000461056 COL6A3P12111 3177 aa8.97□□□□□ -0.97
SND1-202ENST00000461056 PRUNE2Q8WUY3 3088 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 LINC01553A4QN01 128 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 H0YCG3 227 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 N4BP3O15049 544 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 TGFB1I1O43294 461 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 OFD1O75665 1012 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 ERLIN2O94905 339 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 EFEMP2O95967 443 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 RPN1P04843 607 aaKnown RBP8.96□□□□□ -0.98
SND1-202ENST00000461056 KRT18P05783 430 aaKnown RBP8.96□□□□□ -0.98
SND1-202ENST00000461056 C7P10643 843 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 MCF2P10911 925 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 IDEP14735 1019 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 DNAJB2P25686 324 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 KCNJ6P48051 423 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 SMTNP53814 917 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 MCCD1P59942 119 aaPredicted RBP8.96□□□□□ -0.98
SND1-202ENST00000461056 TAP1Q03518 808 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 PNOCQ13519 176 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 ALCAMQ13740 583 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 DCAF4L1Q3SXM0 396 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 ZCWPW2Q504Y3 356 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 COBLL1Q53SF7 1204 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 ZBTB41Q5SVQ8 909 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 TWF2Q6IBS0 349 aaKnown RBP8.96□□□□□ -0.98
SND1-202ENST00000461056 GPR153Q6NV75 609 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 MPZL3Q6UWV2 235 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 ALKAL1Q6UXT8 129 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 TMEM192Q8IY95 271 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 CMTR2Q8IYT2 770 aaKnown RBP8.96□□□□□ -0.98
SND1-202ENST00000461056 CEP120Q8N960 986 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 LPPQ93052 612 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 LRCH3Q96II8 777 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 MRPL4Q9BYD3 311 aaKnown RBP8.96□□□□□ -0.98
SND1-202ENST00000461056 GZF1Q9H116 711 aaPredicted RBP8.96□□□□□ -0.98
SND1-202ENST00000461056 KCTD10Q9H3F6 313 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 CLSTN2Q9H4D0 955 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 TBC1D7Q9P0N9 293 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 HCSTQ9UBK5 93 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 PLAGL2Q9UPG8 496 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 HES2Q9Y543 173 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 UBE4BO95155 1302 aa8.96□□□□□ -0.98
SND1-202ENST00000461056 XIRP2A4UGR9 3374 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 TMEM265A0A087WTH1 108 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 EPOPA6NHQ4 379 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 PTGESO14684 152 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 PRPF6O94906 941 aaKnown RBP8.95□□□□□ -0.98
SND1-202ENST00000461056 NPTXRO95502 500 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 CA3P07451 260 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 ZSCAN20P17040 1043 aaPredicted RBP8.95□□□□□ -0.98
SND1-202ENST00000461056 ABCD1P33897 745 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 GRM5P41594 1212 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 DSC1Q08554 894 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 RAB30Q15771 203 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 KANK3Q6NY19 840 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 CRELD2Q6UXH1 353 aaPredicted RBP8.95□□□□□ -0.98
SND1-202ENST00000461056 RBM43Q6ZSC3 357 aaKnown RBP8.95□□□□□ -0.98
SND1-202ENST00000461056 C12orf56Q8IXR9 622 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 ZSWIM2Q8NEG5 633 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 ERCC4Q92889 916 aaPredicted RBP8.95□□□□□ -0.98
SND1-202ENST00000461056 GBP4Q96PP9 640 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 TMEM117Q9H0C3 514 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 CWH43Q9H720 699 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 MRPL44Q9H9J2 332 aaKnown RBP8.95□□□□□ -0.98
SND1-202ENST00000461056 INSL6Q9Y581 213 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 PCDHA5Q9Y5H7 936 aa8.95□□□□□ -0.98
SND1-202ENST00000461056 MRPL42Q9Y6G3 142 aaKnown RBP8.95□□□□□ -0.98
SND1-202ENST00000461056 GOLGA6L4A6NEF3 574 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 ARL5CA6NH57 179 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 TLL1O43897 1013 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 KINO60870 393 aaKnown RBP8.94□□□□□ -0.98
SND1-202ENST00000461056 RECQL4O94761 1208 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 GCNT3O95395 438 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 STAG3L1P0CL83 205 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 SKIP12755 728 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 MCM4P33991 863 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 WNT7BP56706 349 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 ERVK-21P61565 698 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 PSMD2Q13200 908 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 MORC3Q14149 939 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 NOLC1Q14978 699 aaKnown RBP eCLIP8.94□□□□□ -0.98
SND1-202ENST00000461056 ENOX2Q16206 610 aaKnown RBP8.94□□□□□ -0.98
SND1-202ENST00000461056 TPRNQ4KMQ1 711 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 FAM117BQ6P1L5 589 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 ZC3H3Q8IXZ2 948 aaKnown RBP8.94□□□□□ -0.98
SND1-202ENST00000461056 HELQQ8TDG4 1101 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 RSPH1Q8WYR4 309 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 SNX27Q96L92 541 aa8.94□□□□□ -0.98
SND1-202ENST00000461056 FBXL18Q96ME1 805 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms