RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 BICD1Q96G01 975 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 NXF3Q9H4D5 531 aaKnown RBP23.88■■□□□ 1.41
SSNA1-202ENST00000459860 KANSL3Q9P2N6 904 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 SEL1LQ9UBV2 794 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 TNFSF13BQ9Y275 285 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 HES2Q9Y543 173 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 CARNS1A5YM72 827 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 TTLL13PA6NNM8 815 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 MEIS3P2A8K0S8 358 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 OFD1O75665 1012 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 EDN1P05305 212 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 LINC00271P0C7V0 271 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 CMA1P23946 247 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 ZNF568Q3ZCX4 644 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 NT5DC1Q5TFE4 455 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 ACO2Q99798 780 aaKnown RBP23.87■■□□□ 1.41
SSNA1-202ENST00000459860 CWH43Q9H720 699 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 USP20Q9Y2K6 914 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 GIT1Q9Y2X7 761 aa23.87■■□□□ 1.41
SSNA1-202ENST00000459860 EEF1DP3Q658K8 133 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 TAS1R3Q7RTX0 852 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 CCDC65Q8IXS2 484 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 THNSL1Q8IYQ7 743 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 COLGALT1Q8NBJ5 622 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 DNAJC19Q96DA6 116 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 ZNF558Q96NG5 402 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 TCHPQ9BT92 498 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 TARS2Q9BW92 718 aaKnown RBP23.86■■□□□ 1.41
SSNA1-202ENST00000459860 KBTBD4Q9NVX7 518 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 PARP2Q9UGN5 583 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 ZMYM2Q9UBW7 1377 aa23.86■■□□□ 1.41
SSNA1-202ENST00000459860 NCOR1O75376 2440 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.85■■□□□ 1.41
SSNA1-202ENST00000459860 GOLGA6L4A6NEF3 574 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 PFKFB1P16118 471 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 PPM1AP35813 382 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 MLH1P40692 756 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 ZPBP2Q6X784 338 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 LRRC55Q6ZSA7 311 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 SFR1Q86XK3 245 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 STAMQ92783 540 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 FAM193BQ96PV7 902 aaPredicted RBP23.85■■□□□ 1.41
SSNA1-202ENST00000459860 RPS6KC1Q96S38 1066 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 C1QTNF1Q9BXJ1 281 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 LMAN2LQ9H0V9 348 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 GDPD2Q9HCC8 539 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 TBC1D13Q9NVG8 400 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 HCSTQ9UBK5 93 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 PLXNA4Q9HCM2 1894 aa23.85■■□□□ 1.41
SSNA1-202ENST00000459860 A0A1B0GVL5 298 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 A0A1W2PQ27 194 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 A0A1W2PQ64 194 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 A0A1W2PQD8 194 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 AKAP5P24588 427 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 MATR3P43243 847 aaKnown RBP eCLIP23.84■■□□□ 1.41
SSNA1-202ENST00000459860 ASIC1P78348 528 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 TPRNQ4KMQ1 711 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 HERC4Q5GLZ8 1057 aaPredicted RBP23.84■■□□□ 1.41
SSNA1-202ENST00000459860 MPZL3Q6UWV2 235 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 KLHL23Q8NBE8 558 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 MRPS27Q92552 414 aaKnown RBP23.84■■□□□ 1.41
SSNA1-202ENST00000459860 KCNN1Q92952 543 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 GBP3Q9H0R5 595 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 RNF39Q9H2S5 420 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 EPHX3Q9H6B9 360 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 MRPL44Q9H9J2 332 aaKnown RBP23.84■■□□□ 1.41
SSNA1-202ENST00000459860 PANK4Q9NVE7 773 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 ANKFY1Q9P2R3 1169 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 USP25Q9UHP3 1055 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 TBX20Q9UMR3 447 aa23.84■■□□□ 1.41
SSNA1-202ENST00000459860 ARL5CA6NH57 179 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 HNRNPDLO14979 420 aaKnown RBP23.83■■□□□ 1.41
SSNA1-202ENST00000459860 ZC3H11AO75152 810 aaKnown RBP eCLIP23.83■■□□□ 1.41
SSNA1-202ENST00000459860 TOM1L1O75674 476 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 NMT1P30419 496 aaKnown RBP23.83■■□□□ 1.41
SSNA1-202ENST00000459860 ALDH7A1P49419 539 aaKnown RBP23.83■■□□□ 1.41
SSNA1-202ENST00000459860 LIG4P49917 911 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 KCNT2Q6UVM3 1135 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 KHSRPQ92945 711 aaKnown RBP eCLIP23.83■■□□□ 1.41
SSNA1-202ENST00000459860 HVCN1Q96D96 273 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 MRPL38Q96DV4 380 aaKnown RBP23.83■■□□□ 1.41
SSNA1-202ENST00000459860 GAD1Q99259 594 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 CCDC94Q9BW85 323 aaPredicted RBP23.83■■□□□ 1.41
SSNA1-202ENST00000459860 TRIM9Q9C026 710 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 ST6GALNAC4Q9H4F1 302 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 SNTG2Q9NY99 539 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 CHMP5Q9NZZ3 219 aa23.83■■□□□ 1.41
SSNA1-202ENST00000459860 POMCP01189 267 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 MCF2P10911 925 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 HARSP12081 509 aaKnown RBP23.82■■□□□ 1.4
SSNA1-202ENST00000459860 SYKP43405 635 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 NOLC1Q14978 699 aaKnown RBP eCLIP23.82■■□□□ 1.4
SSNA1-202ENST00000459860 ZBTB33Q86T24 672 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 FSIP1Q8NA03 581 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 CDT1Q9H211 546 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 UBE2ZQ9H832 354 aaPredicted RBP23.82■■□□□ 1.4
SSNA1-202ENST00000459860 ALG13Q9NP73 1137 aaKnown RBP23.82■■□□□ 1.4
SSNA1-202ENST00000459860 CD320Q9NPF0 282 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 OLFML3Q9NRN5 406 aa23.82■■□□□ 1.4
SSNA1-202ENST00000459860 PLAGL2Q9UPG8 496 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms