RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 IGBP1P78318 339 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 CRHR2Q13324 411 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 CNGB1Q14028 1251 aaPredicted RBP4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 NOMO1Q15155 1222 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 ABCB5Q2M3G0 1257 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 FAM214AQ32MH5 1076 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 NRN1LQ496H8 165 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 DCAF17Q5H9S7 520 aaPredicted RBP4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 Q6ZVL8 140 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 DOK3Q7L591 496 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 SPRED1Q7Z699 444 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 OR7D4Q8NG98 312 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 MDM1Q8TC05 714 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 JADE3Q92613 823 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 EXTL1Q92935 676 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 SLC2A13Q96QE2 648 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 MNTQ99583 582 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 CPPED1Q9BRF8 314 aaPredicted RBP4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 GPR87Q9BY21 358 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 ASPSCR1Q9BZE9 553 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 HDAC5Q9UQL6 1122 aa4.05□□□□□ -1.76
SCARNA18-201ENST00000459004 TNKSO95271 1327 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 FAM171A2A8MVW0 826 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 FZD9O00144 591 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PCDHGA12O60330 932 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 ENDOD1O94919 500 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 CCND1P24385 295 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PTPN7P35236 360 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 WASP42768 502 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 SCNN1GP51170 649 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 RABGGTBP53611 331 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 MGAT2Q10469 447 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 FOXE3Q13461 319 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PUM1Q14671 1186 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 RRP1BQ14684 758 aaKnown RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 ACAP2Q15057 778 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PCBP2Q15366 365 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 BRDTQ58F21 947 aaPredicted RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 FAM47AQ5JRC9 791 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PRAMEF14Q5SWL7 426 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 NAIF1Q69YI7 327 aaPredicted RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 RNF207Q6ZRF8 634 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 Q6ZRM9 215 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 HTR3DQ70Z44 454 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 GGNQ86UU5 652 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PNMA8AQ86V59 439 aaPredicted RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 TMPRSS6Q8IU80 811 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 RPUSD2Q8IZ73 545 aaKnown RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PQLC1Q8N2U9 271 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PPM1NQ8N819 430 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 MB21D1Q8N884 522 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 IL17DQ8TAD2 202 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 UHRF1Q96T88 793 aaPredicted RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 LSM14BQ9BX40 385 aaKnown RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 SLC13A1Q9BZW2 595 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 ZNF703Q9H7S9 590 aaPredicted RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 DNM3Q9UQ16 869 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PCDHGA9Q9Y5G4 932 aaKnown RBP4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PCDHGA8Q9Y5G5 932 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PCDHGA7Q9Y5G6 932 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PCDHGA6Q9Y5G7 932 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 PCDHGA3Q9Y5H0 932 aa4.04□□□□□ -1.76
SCARNA18-201ENST00000459004 KLRG2A4D1S0 409 aaPredicted RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 TBKBP1A7MCY6 615 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 PRR5-ARHGAP8B1AHC4 643 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 B5MCH6 92 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 MATN3O15232 486 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 XPOTO43592 962 aaKnown RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 NDUFS2O75306 463 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 HK1P19367 917 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 SREBF1P36956 1147 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 FLT3LGP49771 235 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 SLC16A1P53985 500 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 EXOSC10Q01780 885 aaKnown RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 PTH1RQ03431 593 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 SP140Q13342 867 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 VPS72Q15906 364 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 PTPN21Q16825 1174 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 MFSD14BQ5SR56 506 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 GPRIN1Q7Z2K8 1008 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 ZNF572Q7Z3I7 529 aaPredicted RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 XYLT1Q86Y38 959 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 TRMT2AQ8IZ69 625 aaKnown RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 OR52N2Q8NGI0 321 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 NRG4Q8WWG1 115 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 HOXB13Q92826 284 aaPredicted RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 CYFIP2Q96F07 1278 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 DMRT3Q9NQL9 472 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 TYW1Q9NV66 732 aaKnown RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 PARPBPQ9NWS1 579 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 MOCS1Q9NZB8 636 aa4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 SAP30BPQ9UHR5 308 aaKnown RBP4.03□□□□□ -1.76
SCARNA18-201ENST00000459004 PJA2O43164 708 aa4.02□□□□□ -1.77
SCARNA18-201ENST00000459004 ADCY6O43306 1168 aa4.02□□□□□ -1.77
SCARNA18-201ENST00000459004 AMHP03971 560 aa4.02□□□□□ -1.77
SCARNA18-201ENST00000459004 IL2RBP14784 551 aa4.02□□□□□ -1.77
SCARNA18-201ENST00000459004 TNFRSF1AP19438 455 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms