RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 KNOP1Q1ED39 458 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 SLFN12LQ6IEE8 588 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 MYOCDQ8IZQ8 938 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 GBP3Q9H0R5 595 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 KCTD10Q9H3F6 313 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 RNF19AQ9NV58 838 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 TISP43B9A030 160 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 PDXKO00764 312 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 INPPL1O15357 1258 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 FAM189A1O60320 539 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 DGKIO75912 1065 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 KIF20AO95235 890 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 GARTP22102 1010 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 PRCPP42785 496 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 NFKBIBQ15653 356 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 ZNF568Q3ZCX4 644 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 APBB1IPQ7Z5R6 666 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 HERC6Q8IVU3 1022 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 C12orf56Q8IXR9 622 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 SYCP3Q8IZU3 236 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 RSPH1Q8WYR4 309 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 PGBD4Q96DM1 585 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 BICD1Q96G01 975 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 PCDHB7Q9Y5E2 793 aa12.87□□□□□ -0.35
TRAPPC12-212ENST00000457845 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 KIAA0391O15091 583 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 OGTO15294 1046 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 PPP1R2P41236 205 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 GRM5P41594 1212 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 POU5F1Q01860 360 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 NFIL3Q16649 462 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 LRIT3Q3SXY7 679 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 FAM109BQ6ICB4 259 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 NELFCDQ8IXH7 590 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 SMYD4Q8IYR2 804 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 ADSSL1Q8N142 457 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 CEP120Q8N960 986 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 TCHPQ9BT92 498 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 NXF3Q9H4D5 531 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 UBN1Q9NPG3 1134 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 TYW1Q9NV66 732 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 HES2Q9Y543 173 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 MYO9BQ13459 2157 aa12.86□□□□□ -0.35
TRAPPC12-212ENST00000457845 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 HOXA2O43364 376 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 OFD1O75665 1012 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 UPP2O95045 317 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 ADRB2P07550 413 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 ITGA4P13612 1032 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 KYAT1Q16773 422 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 XKR4Q5GH76 650 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 CLLU1OSQ5K130 101 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 ISM2Q6H9L7 571 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 FOXR2Q6PJQ5 311 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 ZBTB33Q86T24 672 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 HACE1Q8IYU2 909 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 GSTCDQ8NEC7 633 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 GOLGA5Q8TBA6 731 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 SP7Q8TDD2 431 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 POMGNT1Q8WZA1 660 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 LPPQ93052 612 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 FBXL18Q96ME1 805 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 RAD9AQ99638 391 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 RSAD1Q9HA92 442 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 AGPAT3Q9NRZ7 376 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 DMAC2Q9NW81 257 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 SNTG2Q9NY99 539 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 ANKFY1Q9P2R3 1169 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 CPSF3Q9UKF6 684 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 AGO2Q9UKV8 859 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 LRFN2Q9ULH4 789 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 MAPK8IP1Q9UQF2 711 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 GIT1Q9Y2X7 761 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
TRAPPC12-212ENST00000457845 GRXCR1A8MXD5 290 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 BIN1O00499 593 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 MEFVO15553 781 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 SMAD3P84022 425 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 MYBPC2Q14324 1141 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms