RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 PPP1R16BQ96T49 567 aa7.21□□□□□ -1.25
FN1-213ENST00000456923 UPF3AQ9H1J1 476 aaKnown RBP7.21□□□□□ -1.25
FN1-213ENST00000456923 TMEM206Q9H813 350 aa7.21□□□□□ -1.25
FN1-213ENST00000456923 PAK6Q9NQU5 681 aaPredicted RBP7.21□□□□□ -1.25
FN1-213ENST00000456923 ZMAT5Q9UDW3 170 aaKnown RBP7.21□□□□□ -1.25
FN1-213ENST00000456923 Q9Y3F1 56 aa7.21□□□□□ -1.25
FN1-213ENST00000456923 SYNRGQ9UMZ2 1314 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 POTEB2H3BUK9 544 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 F13A1P00488 732 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 CAPN1P07384 714 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 MSL3P1P0C860 447 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 TGFB3P10600 412 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 TKTP29401 623 aaKnown RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 FCGRTP55899 365 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 HERVK_113P62684 666 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 TCP10Q12799 353 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 COG2Q14746 738 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 TREML2Q5T2D2 321 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 C10orf76Q5T2E6 689 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 PPP1R18Q6NYC8 613 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 OTOP1Q7RTM1 612 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 SPATA24Q86W54 205 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 NPLOC4Q8TAT6 608 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 OTUD5Q96G74 571 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 C12orf4Q9NQ89 552 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 INIPQ9NRY2 104 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 ZNF214Q9UL59 606 aaPredicted RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 TARSL2A2RTX5 802 aaKnown RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 TMEM221A6NGB7 291 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 CCDC85CA6NKD9 419 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 SRGAP2O75044 1071 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 GNA14O95837 355 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 SPATA31D3P0C874 917 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 CYP2D6P10635 497 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 GLULP15104 373 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 ANXA13P27216 316 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 RNASELQ05823 741 aaKnown RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 BIRC3Q13489 604 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 GRM4Q14833 912 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 HABP4Q5JVS0 413 aaKnown RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 SPATA31D4Q6ZUB0 917 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 CRACR2BQ8N4Y2 399 aaPredicted RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 ESR2Q92731 530 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 UBN1Q9NPG3 1134 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 MRPL40Q9NQ50 206 aaKnown RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 METTL5Q9NRN9 209 aaKnown RBP7.21□□□□□ -1.26
FN1-213ENST00000456923 NDFIP2Q9NV92 336 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 FBXO40Q9UH90 709 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 HPCAL4Q9UM19 191 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 EXOC7Q9UPT5 735 aa7.21□□□□□ -1.26
FN1-213ENST00000456923 ZNF536O15090 1300 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 SNPHO15079 494 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 MGEA5O60502 916 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 CUTAO60888 179 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 PRKACAP17612 351 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 CST5P28325 142 aaPredicted RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 CTGFP29279 349 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 KPNA1P52294 538 aaPredicted RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 PICALMQ13492 652 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 SAFBQ15424 915 aaKnown RBP eCLIP7.2□□□□□ -1.26
FN1-213ENST00000456923 BBS9Q3SYG4 887 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 KIAA1755Q5JYT7 1200 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 RNF19BQ6ZMZ0 732 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ZBTB46Q86UZ6 589 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 SNX32Q86XE0 403 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 RNF10Q8N5U6 811 aaKnown RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 RNF25Q96BH1 459 aaPredicted RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 RRP36Q96EU6 259 aaKnown RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 HSPBAP1Q96EW2 488 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 NSRP1Q9H0G5 558 aaKnown RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 RIOX1Q9H6W3 641 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 LUC7LQ9NQ29 371 aaKnown RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 TELO2Q9Y4R8 837 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 NDUFB9Q9Y6M9 179 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ARPC4-TTLL3A0A0A6YYG9 625 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 RASA4BC9J798 803 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 GOLGA8MH3BSY2 632 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 FANCGO15287 622 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ATP9BO43861 1147 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ATP9AO75110 1047 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 EDNRBP24530 442 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ERVK-9P63128 1117 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ERVK-24P63145 666 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 CCNA1P78396 465 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ACAP1Q15027 740 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ZNF792Q3KQV3 632 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 RBM20Q5T481 1227 aaKnown RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 TOGARAM2Q6ZUX3 1019 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 BPHLQ86WA6 291 aaPredicted RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.2□□□□□ -1.26
FN1-213ENST00000456923 IGDCC4Q8TDY8 1250 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 CENPTQ96BT3 561 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 KLHL29Q96CT2 875 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 IL25Q9H293 177 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ARMC7Q9H6L4 198 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 ACTR5Q9H9F9 607 aaPredicted RBP7.2□□□□□ -1.26
FN1-213ENST00000456923 TUFT1Q9NNX1 390 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 TRIM17Q9Y577 477 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 NEDD4P46934 1319 aa7.2□□□□□ -1.26
FN1-213ENST00000456923 PHLPP2Q6ZVD8 1323 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms