RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 NT5DC1Q5TFE4 455 aa19.87■□□□□ 0.77
PDLIM2-215ENST00000456545 ATL3Q6DD88 541 aa19.87■□□□□ 0.77
PDLIM2-215ENST00000456545 TCF25Q9BQ70 676 aa19.87■□□□□ 0.77
PDLIM2-215ENST00000456545 REEP2Q9BRK0 252 aa19.87■□□□□ 0.77
PDLIM2-215ENST00000456545 SNTG2Q9NY99 539 aa19.87■□□□□ 0.77
PDLIM2-215ENST00000456545 DNAJB4Q9UDY4 337 aa19.87■□□□□ 0.77
PDLIM2-215ENST00000456545 PLXNA4Q9HCM2 1894 aa19.87■□□□□ 0.77
PDLIM2-215ENST00000456545 TRANK1O15050 2925 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 DLL1O00548 723 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 DDHD2O94830 711 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 KCNA5P22460 613 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 STAT6P42226 847 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 MATR3P43243 847 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 OR1G1P47890 313 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 AFF1P51825 1210 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 ERVFC1P60507 584 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 PKP1Q13835 747 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 PLPP4Q5VZY2 271 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 EEF1DP3Q658K8 133 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 PABPC5Q96DU9 382 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 ZFP42Q96MM3 310 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 TMEM175Q9BSA9 504 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 PARVGQ9HBI0 331 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 NGRNQ9NPE2 291 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 ARHGAP28Q9P2N2 729 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 TNFSF13BQ9Y275 285 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 GDAQ9Y2T3 454 aa19.86■□□□□ 0.77
PDLIM2-215ENST00000456545 CUTAO60888 179 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 NRIP1P48552 1158 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 SLC11A1P49279 550 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 HYAL1Q12794 435 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 GIT2Q14161 759 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 DYMQ7RTS9 669 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 ZBTB33Q86T24 672 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 PDILTQ8N807 584 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 KCNG4Q8TDN1 519 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 BICD1Q96G01 975 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 IGSF21Q96ID5 467 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 ACO2Q99798 780 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 TARS2Q9BW92 718 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 MIOSQ9NXC5 875 aa19.85■□□□□ 0.77
PDLIM2-215ENST00000456545 MYH15Q9Y2K3 1946 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 NRP1O14786 923 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 TRAK2O60296 914 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 CXCL14O95715 111 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 EDN1P05305 212 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 ME1P48163 572 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 YARSP54577 528 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 SMC1AQ14683 1233 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 ZNF568Q3ZCX4 644 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 HAUS6Q7Z4H7 955 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 ADGRD2Q7Z7M1 963 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 VPS52Q8N1B4 723 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 TMEM161BQ8NDZ6 487 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 LRRC15Q8TF66 581 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 CCDC94Q9BW85 323 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 COLEC11Q9BWP8 271 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 PCDHGC5Q9Y5F6 944 aa19.84■□□□□ 0.77
PDLIM2-215ENST00000456545 K7ENM7 598 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 PER2O15055 1255 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 RECQL4O94761 1208 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 HARSP12081 509 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 GTF2F1P35269 517 aaKnown RBP eCLIP19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 NDUFV1P49821 464 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 KCNQ1P51787 676 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 DNM1Q05193 864 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 GRIK3Q13003 919 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 DDX53Q86TM3 631 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 FAM178BQ8IXR5 827 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 STK39Q9UEW8 545 aa19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 PRG3Q9Y2Y8 225 aaPredicted RBP19.83■□□□□ 0.77
PDLIM2-215ENST00000456545 TDRD15B5MCY1 1934 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 EYSQ5T1H1 3165 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 MYO7AQ13402 2215 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 FSD2A1L4K1 749 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 H3BQ06 376 aaPredicted RBP19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 INPPL1O15357 1258 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 THP07101 528 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 MAPTP10636 758 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 SCP2P22307 547 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 ABCD1P33897 745 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 NCKAP1LP55160 1127 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 OSTNP61366 133 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 TAS1R3Q7RTX0 852 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 COLGALT2Q8IYK4 626 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 LRRC27Q9C0I9 530 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 FAM13BQ9NYF5 915 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 ATP6V1DQ9Y5K8 247 aa19.82■□□□□ 0.76
PDLIM2-215ENST00000456545 FSCN2O14926 492 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 CLDN3O15551 220 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 SRGAP2BP0DMP2 458 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 MCF2P10911 925 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 LIG4P49917 911 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 ADAM15Q13444 863 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 PUS10Q3MIT2 529 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 LEXMQ3ZCV2 418 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 MPZL3Q6UWV2 235 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 TMEM173Q86WV6 379 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 EFHBQ8N7U6 833 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms