RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 MSL3Q8N5Y2 521 aaKnown RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 ZSWIM2Q8NEG5 633 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 RTF1Q92541 710 aaKnown RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 C1QTNF7Q9BXJ2 289 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 IGSF5Q9NSI5 407 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 PPP1R1BQ9UD71 204 aaPredicted RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 USP15Q9Y4E8 981 aaPredicted RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 MYPNQ86TC9 1320 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 ST20-MTHFSA0A0A6YYL1 179 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 FAM221BA6H8Z2 402 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 LRRC3CA6NJW4 275 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 CFIP05156 583 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 CLEC2LP0C7M8 214 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 RARRES1P49788 294 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 CACNA2D1P54289 1103 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 SCAPQ12770 1279 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 RASA3Q14644 834 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 FAM102AQ5T9C2 384 aaPredicted RBP3.36□□□□□ -1.87
LINC02540-201ENST00000455554 ANKS6Q68DC2 871 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 RNF169Q8NCN4 708 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 TFAP2CQ92754 450 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 Q96MF0 132 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 ZNF778Q96MU6 729 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 CDC5LQ99459 802 aaKnown RBP3.36□□□□□ -1.87
LINC02540-201ENST00000455554 FDXACB1Q9BRP7 624 aaPredicted RBP3.36□□□□□ -1.87
LINC02540-201ENST00000455554 NCOA5Q9HCD5 579 aaKnown RBP3.36□□□□□ -1.87
LINC02540-201ENST00000455554 KMT5AQ9NQR1 393 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 TOMM22Q9NS69 142 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 B4GALT6Q9UBX8 382 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 SPO11Q9Y5K1 396 aa3.36□□□□□ -1.87
LINC02540-201ENST00000455554 A0A1W2PR48 441 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 TBKBP1A7MCY6 615 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 NRP2O60462 931 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 PROP1O75360 226 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 ZFPL1O95159 310 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 XPAP23025 273 aaPredicted RBP3.35□□□□□ -1.87
LINC02540-201ENST00000455554 SRSF4Q08170 494 aaKnown RBP3.35□□□□□ -1.87
LINC02540-201ENST00000455554 METRNLQ641Q3 311 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 Q6ZNX1 250 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 GPR149Q86SP6 731 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 SH2D3CQ8N5H7 860 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 FERMT2Q96AC1 680 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 DEPDC7Q96QD5 511 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 BRIP1Q9BX63 1249 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 ZMAT4Q9H898 229 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 USP18Q9UMW8 372 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 ZMYM3Q14202 1370 aa3.35□□□□□ -1.87
LINC02540-201ENST00000455554 CGB1A6NKQ9 187 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 CBX4O00257 560 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 ELL2O00472 640 aaPredicted RBP3.34□□□□□ -1.87
LINC02540-201ENST00000455554 PLD2O14939 933 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 OPA1O60313 960 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 ASLP04424 464 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 PFKMP08237 780 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 CD40P25942 277 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 GPR15P49685 360 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 NRG3P56975 720 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 MGAT5Q09328 741 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 UBE3CQ15386 1083 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 BMT2Q1RMZ1 405 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 SPDYE7PQ495Y7 208 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 CCDC178Q5BJE1 867 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 AGAP9Q5VTM2 703 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 CREB3L3Q68CJ9 461 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 LMBR1LQ6UX01 489 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 JMYQ8N9B5 988 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 ZFP28Q8NHY6 868 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 NEU1Q99519 415 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 MTFR1LQ9H019 292 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 KLK15Q9H2R5 256 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 OXSMQ9NWU1 459 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 FOXJ2Q9P0K8 574 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 LRIT1Q9P2V4 623 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 ATP11BQ9Y2G3 1177 aa3.34□□□□□ -1.87
LINC02540-201ENST00000455554 RAPGEF3O95398 923 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 CHN2P52757 468 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 MRPS35P82673 323 aaKnown RBP3.33□□□□□ -1.88
LINC02540-201ENST00000455554 SERINC3Q13530 473 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 ZNF460Q14592 562 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 ESPNLQ6ZVH7 1005 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 OR56A1Q8NGH5 318 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 GAB3Q8WWW8 586 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 PDLIM2Q96JY6 352 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 DNAJC7Q99615 494 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 ALOXE3Q9BYJ1 711 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 TBCCD1Q9NVR7 557 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 SNTG2Q9NY99 539 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 SLC17A6Q9P2U8 582 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 ZNF70Q9UC06 446 aaPredicted RBP3.33□□□□□ -1.88
LINC02540-201ENST00000455554 NOX1Q9Y5S8 564 aa3.33□□□□□ -1.88
LINC02540-201ENST00000455554 DRGXA6NNA5 263 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 PRAMEF4O60810 478 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 DNAJC8O75937 253 aaPredicted RBP3.32□□□□□ -1.88
LINC02540-201ENST00000455554 LTA4HP09960 611 aaKnown RBP3.32□□□□□ -1.88
LINC02540-201ENST00000455554 HOXB6P17509 224 aaKnown RBP3.32□□□□□ -1.88
LINC02540-201ENST00000455554 FLT3P36888 993 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 LRRC32Q14392 662 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms