RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TMEM151BQ8IW70 566 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 REPS2Q8NFH8 660 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 NKD1Q969G9 470 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 SIGLEC10Q96LC7 697 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 C20orf173Q96LM9 149 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 GLT1D1Q96MS3 346 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 NEUROD6Q96NK8 337 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 KCNC2Q96PR1 638 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 SLC9A7Q96T83 725 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 NOL10Q9BSC4 688 aaKnown RBP4.47□□□□□ -1.69
RBM39-220ENST00000455343 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 CABP5Q9NP86 173 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 PARD6AQ9NPB6 346 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 ERVK13-1Q9NX77 482 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 SIRT5Q9NXA8 310 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 PRR13Q9NZ81 148 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 SAP30BPQ9UHR5 308 aaKnown RBP4.47□□□□□ -1.69
RBM39-220ENST00000455343 HDAC5Q9UQL6 1122 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 IRAK3Q9Y616 596 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 TAF6LQ9Y6J9 622 aa4.47□□□□□ -1.69
RBM39-220ENST00000455343 UMODL1Q5DID0 1318 aa4.46□□□□□ -1.69
RBM39-220ENST00000455343 A0A0U1RQG5 324 aaPredicted RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 FAM86C2PA6NEL3 165 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 EPOPA6NHQ4 379 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 MEIS1O00470 390 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 N4BP3O15049 544 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 SRGAP3O43295 1099 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 ADCY6O43306 1168 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 LPXNO60711 386 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 TRIM13O60858 407 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 MYOGP15173 224 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 BMP7P18075 431 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 CYP2C18P33260 490 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 RABGGTBP53611 331 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 GJA9P57773 515 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 NHLH1Q02575 133 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 AUHQ13825 339 aaKnown RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 KIR3DS1Q14943 382 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 TMED8Q6PL24 325 aaPredicted RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 CRTC3Q6UUV7 619 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 OTOP2Q7RTS6 562 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 SLCO6A1Q86UG4 719 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 CERS3Q8IU89 383 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 PCSK9Q8NBP7 692 aaKnown RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 EAF1Q96JC9 268 aaPredicted RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 MEIS3Q99687 375 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 RIOK1Q9BRS2 568 aaKnown RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 UPF3AQ9H1J1 476 aaKnown RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 WNT8AQ9H1J5 351 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 KCNH6Q9H252 994 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 MTIF3Q9H2K0 278 aaKnown RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 ZCCHC4Q9H5U6 513 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 VCPKMTQ9H867 229 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 CNTD2Q9H8S5 307 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 GPR108Q9NPR9 543 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 FBXL21Q9UKT6 434 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 ZNF214Q9UL59 606 aaPredicted RBP4.46□□□□□ -1.7
RBM39-220ENST00000455343 FAM184BQ9ULE4 1060 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 CNPY2Q9Y2B0 182 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 TMX2Q9Y320 296 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 SIPA1L1O43166 1804 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 ZNF236Q9UL36 1845 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 GRIN2DO15399 1336 aa4.46□□□□□ -1.7
RBM39-220ENST00000455343 CACNA1FO60840 1977 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 CFAP54Q96N23 3096 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.45□□□□□ -1.7
RBM39-220ENST00000455343 VWA5AO00534 786 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 ABLIM1O14639 778 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 WDR46O15213 610 aaKnown RBP4.45□□□□□ -1.7
RBM39-220ENST00000455343 SHOXO15266 292 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 FLOT1O75955 427 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 VAV1P15498 845 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 COPB2P35606 906 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 STAT3P40763 770 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 CDR1P51861 262 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 LAPTM5Q13571 262 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 ACVR2BQ13705 512 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 PLS1Q14651 629 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 KCTD2Q14681 263 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 GORABQ5T7V8 394 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 TMEM179Q6ZVK1 233 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 FAM178BQ8IXR5 827 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 MAGEB6Q8N7X4 407 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 PHOSPHO2Q8TCD6 241 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 PANK1Q8TE04 598 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 FGD4Q96M96 766 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 MMP19Q99542 508 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 SPON2Q9BUD6 331 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 CDADC1Q9BWV3 514 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 SEZ6LQ9BYH1 1024 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 TANGO6Q9C0B7 1094 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 KATNBL1Q9H079 304 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 BCL11AQ9H165 835 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 ABHD16BQ9H3Z7 469 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 HIPK3Q9H422 1215 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 EPB41L4AQ9HCS5 686 aaPredicted RBP4.45□□□□□ -1.7
RBM39-220ENST00000455343 TNFRSF12AQ9NP84 129 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 PIH1D3Q9NQM4 214 aaKnown RBP4.45□□□□□ -1.7
RBM39-220ENST00000455343 KLHL14Q9P2G3 628 aa4.45□□□□□ -1.7
RBM39-220ENST00000455343 SUCOQ9UBS9 1254 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms