RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CCDC113Q9H0I3 377 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 FZD8Q9H461 694 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 RXFP1Q9HBX9 757 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 LIMD1Q9UGP4 676 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 SORCS3Q9UPU3 1222 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 NR2E1Q9Y466 385 aa17.81■□□□□ 0.44
GPC1-206ENST00000455111 PTGESO14684 152 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 PAPLNO95428 1278 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 XRCC6P12956 609 aaKnown RBP eCLIP17.8■□□□□ 0.44
GPC1-206ENST00000455111 KLRC2P26717 231 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 TFDP1Q14186 410 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 PCBP1Q15365 356 aaKnown RBP eCLIP17.8■□□□□ 0.44
GPC1-206ENST00000455111 CABP7Q86V35 215 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 TMEM105Q8N8V8 129 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 ZNF707Q96C28 371 aaPredicted RBP17.8■□□□□ 0.44
GPC1-206ENST00000455111 FAM193BQ96PV7 902 aaPredicted RBP17.8■□□□□ 0.44
GPC1-206ENST00000455111 POLR3CQ9BUI4 534 aaPredicted RBP17.8■□□□□ 0.44
GPC1-206ENST00000455111 PDZD7Q9H5P4 517 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 SFXN1Q9H9B4 322 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 TUFT1Q9NNX1 390 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 UBN1Q9NPG3 1134 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 DBR1Q9UK59 544 aaKnown RBP17.8■□□□□ 0.44
GPC1-206ENST00000455111 GIT1Q9Y2X7 761 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 ZDBF2Q9HCK1 2354 aa17.8■□□□□ 0.44
GPC1-206ENST00000455111 RFPL2O75678 378 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 TOB1P50616 345 aaPredicted RBP17.79■□□□□ 0.44
GPC1-206ENST00000455111 DSG1Q02413 1049 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 ATAT1Q5SQI0 421 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 EEF1DP3Q658K8 133 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 SLC27A1Q6PCB7 646 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 MAN1C1Q9NR34 630 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 MRPL17Q9NRX2 175 aaKnown RBP17.79■□□□□ 0.44
GPC1-206ENST00000455111 FAM86C1Q9NVL1 165 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 USTQ9Y2C2 406 aa17.79■□□□□ 0.44
GPC1-206ENST00000455111 COL4A3Q01955 1670 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 NOTCH4Q99466 2003 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 CARNS1A5YM72 827 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 LRRIQ4A6NIV6 560 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 OR52Z1P0C646 297 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 SPATA31D3P0C874 917 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 RPL17P18621 184 aaKnown RBP17.78■□□□□ 0.44
GPC1-206ENST00000455111 GLUD2P49448 558 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 MTMR3Q13615 1198 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 IL17AQ16552 155 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 FAM187BQ17R55 369 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 C8orf34Q49A92 452 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 LILRA6Q6PI73 481 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 SPATA31D4Q6ZUB0 917 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 PPFIBP1Q86W92 1011 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 SUGP1Q8IWZ8 645 aaKnown RBP17.78■□□□□ 0.44
GPC1-206ENST00000455111 TDRD5Q8NAT2 981 aaKnown RBP17.78■□□□□ 0.44
GPC1-206ENST00000455111 FBXO18Q8NFZ0 1043 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 KIFC3Q9BVG8 833 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 EMILIN2Q9BXX0 1053 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 LIMCH1Q9UPQ0 1083 aa17.78■□□□□ 0.44
GPC1-206ENST00000455111 RPA1P27694 616 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 TRIM29Q14134 588 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 BMS1Q14692 1282 aaKnown RBP17.77■□□□□ 0.44
GPC1-206ENST00000455111 RTP2Q5QGT7 225 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 CWF19L1Q69YN2 538 aaKnown RBP17.77■□□□□ 0.44
GPC1-206ENST00000455111 FUT10Q6P4F1 479 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 PADI6Q6TGC4 694 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 CD300LGQ6UXG3 332 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 C8orf76Q96K31 380 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 FOXP1Q9H334 677 aaPredicted RBP17.77■□□□□ 0.44
GPC1-206ENST00000455111 SNTG2Q9NY99 539 aa17.77■□□□□ 0.44
GPC1-206ENST00000455111 URODP06132 367 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 NPR3P17342 541 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 CYP11B2P19099 503 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 GRIK3Q13003 919 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 TTC38Q5R3I4 469 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 NT5DC1Q5TFE4 455 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 PRSS55Q6UWB4 352 aaPredicted RBP17.76■□□□□ 0.43
GPC1-206ENST00000455111 C15orf39Q6ZRI6 1047 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 ZBTB33Q86T24 672 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 UBALD2Q8IYN6 164 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 CMASQ8NFW8 434 aaPredicted RBP17.76■□□□□ 0.43
GPC1-206ENST00000455111 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
GPC1-206ENST00000455111 PRMT7Q9NVM4 692 aaPredicted RBP17.76■□□□□ 0.43
GPC1-206ENST00000455111 PARP2Q9UGN5 583 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 ADAM28Q9UKQ2 775 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 ZMYM2Q9UBW7 1377 aa17.76■□□□□ 0.43
GPC1-206ENST00000455111 PDCD11Q14690 1871 aaKnown RBP17.75■□□□□ 0.43
GPC1-206ENST00000455111 CCDC195A0A1B0GUA6 201 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 PP2D1A8MPX8 630 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 ADAM12O43184 909 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 TGM5O43548 720 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 NARSO43776 548 aaKnown RBP17.75■□□□□ 0.43
GPC1-206ENST00000455111 KIF4AO95239 1232 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 PTPN5P54829 565 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 PALB2Q86YC2 1186 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 NOSTRINQ8IVI9 506 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 GLYCTKQ8IVS8 523 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 DAW1Q8N136 415 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 MCPH1Q8NEM0 835 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 HASPINQ8TF76 798 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 RSAD2Q8WXG1 361 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 PRIMPOLQ96LW4 560 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 NACC1Q96RE7 527 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms