RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 EHHADHQ08426 723 aa30.69■■■□□ 2.5
SMARCC1-203ENST00000454240 MAP4K3Q8IVH8 894 aa30.69■■■□□ 2.5
SMARCC1-203ENST00000454240 TYW1Q9NV66 732 aaKnown RBP30.69■■■□□ 2.5
SMARCC1-203ENST00000454240 GADD45BO75293 160 aaPredicted RBP30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 CASP5P51878 434 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 FAM160A1Q05DH4 1040 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 MPZL3Q6UWV2 235 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 APBB1IPQ7Z5R6 666 aaPredicted RBP30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 TMEM192Q8IY95 271 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 ARNTL2Q8WYA1 636 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 ZBTB45Q96K62 511 aaPredicted RBP30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 FGFBP2Q9BYJ0 223 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 CDT1Q9H211 546 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 CWH43Q9H720 699 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 GIT1Q9Y2X7 761 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 RWDD3Q9Y3V2 267 aa30.68■■■□□ 2.5
SMARCC1-203ENST00000454240 TDRD15B5MCY1 1934 aaKnown RBP30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 INPPL1O15357 1258 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 GTPBP6O43824 516 aaPredicted RBP30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 KLRC4O43908 158 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 ZNF568Q3ZCX4 644 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 EPC2Q52LR7 807 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 NOMO2Q5JPE7 1267 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 LRRC43Q8N309 656 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 GUCD1Q96NT3 240 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 APOL6Q9BWW8 343 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 MRPL9Q9BYD2 267 aaKnown RBP30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 MTUS1Q9ULD2 1270 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 PCDHB13Q9Y5F0 798 aa30.67■■■□□ 2.5
SMARCC1-203ENST00000454240 EPOPA6NHQ4 379 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 GCNT3O95395 438 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 MYBP10242 640 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 MCF2P10911 925 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 AKAP5P24588 427 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 BMPR1AP36894 532 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 AFF1P51825 1210 aaKnown RBP30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 ALCAMQ13740 583 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 HPS3Q969F9 1004 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 BICD1Q96G01 975 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 TCHPQ9BT92 498 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 PRDM12Q9H4Q4 367 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 SNTG2Q9NY99 539 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 HCSTQ9UBK5 93 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 TRIP11Q15643 1979 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 ZMYM2Q9UBW7 1377 aa30.66■■■□□ 2.5
SMARCC1-203ENST00000454240 C5orf67F2Z3F1 127 aa30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 LIG4P49917 911 aa30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 MCL1Q07820 350 aa30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 L1TD1Q5T7N2 865 aaKnown RBP30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 KANK3Q6NY19 840 aa30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 ZBTB33Q86T24 672 aa30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 CDX2Q99626 313 aaPredicted RBP30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 PARP2Q9UGN5 583 aa30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 INPP5FQ9Y2H2 1132 aa30.65■■■□□ 2.5
SMARCC1-203ENST00000454240 ARL5CA6NH57 179 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 HNRNPDLO14979 420 aaKnown RBP30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 CLDN3O15551 220 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 RB1P06400 928 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 PRR29P0C7W0 189 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 KCNA1Q09470 495 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 FAM26FQ5R3K3 315 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 SLC39A4Q6P5W5 647 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 GAD1Q99259 594 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 HAPLN2Q9GZV7 340 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 TBC1D13Q9NVG8 400 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 KANSL3Q9P2N6 904 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 ANKFY1Q9P2R3 1169 aa30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 COL4A4P53420 1690 aaPredicted RBP30.64■■■□□ 2.5
SMARCC1-203ENST00000454240 CITO14578 2027 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 TRANK1O15050 2925 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 NR1I2O75469 434 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 CTNNB1P35222 781 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 MLH1P40692 756 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 GRM5P41594 1212 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 DPYDQ12882 1025 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 NOLC1Q14978 699 aaKnown RBP eCLIP30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 CEP120Q8N960 986 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 GLIS3Q8NEA6 775 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 GSTCDQ8NEC7 633 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 FBXO22Q8NEZ5 403 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 URGCPQ8TCY9 931 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 ZFP42Q96MM3 310 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 TIGD1Q96MW7 591 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 ACCSQ96QU6 501 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 PLVAPQ9BX97 442 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 MIOSQ9NXC5 875 aa30.63■■■□□ 2.49
SMARCC1-203ENST00000454240 RFXAPO00287 272 aa30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 RECQL4O94761 1208 aa30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 UBE2HP62256 183 aa30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 SPOUT1Q5T280 376 aaKnown RBP30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 EPM2AIP1Q7L775 607 aaPredicted RBP30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 CCDC34Q96HJ3 373 aa30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 KLK14Q9P0G3 267 aa30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 EXOC7Q9UPT5 735 aa30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 STYXL1Q9Y6J8 313 aa30.62■■■□□ 2.49
SMARCC1-203ENST00000454240 ANKRD63C9JTQ0 380 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 PRPF6O94906 941 aaKnown RBP30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 LAG3P18627 525 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 KMT5BQ4FZB7 885 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 STXBP4Q6ZWJ1 553 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms