RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 DNAJB2P25686 324 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 MCM4P33991 863 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 MCL1Q07820 350 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 KCNA1Q09470 495 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 STK4Q13043 487 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 NOLC1Q14978 699 aaKnown RBP eCLIP15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 CAMK4Q16566 473 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 KYAT1Q16773 422 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 GLB1LQ6UWU2 654 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 AGMOQ6ZNB7 445 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 CMTR2Q8IYT2 770 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 FIBCD1Q8N539 461 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 HELQQ8TDG4 1101 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 CASD1Q96PB1 797 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 CCDC94Q9BW85 323 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 CDT1Q9H211 546 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 NKX2-4Q9H2Z4 354 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 NXF3Q9H4D5 531 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 SNTG2Q9NY99 539 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 KANSL3Q9P2N6 904 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 GIT1Q9Y2X7 761 aa15.98■□□□□ 0.15
NCKIPSD-207ENST00000453349 UBE4BO95155 1302 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 ANKRD63C9JTQ0 380 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 OFD1O75665 1012 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 CA3P07451 260 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 HARSP12081 509 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 AKAP5P24588 427 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 GRM5P41594 1212 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 YARSP54577 528 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 PAN2Q504Q3 1202 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 NELFCDQ8IXH7 590 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 THNSL1Q8IYQ7 743 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 GLIS3Q8NEA6 775 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 SPATA20Q8TB22 786 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 URGCPQ8TCY9 931 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 SCFD1Q8WVM8 642 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 POMGNT1Q8WZA1 660 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 ERCC4Q92889 916 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 TIFAQ96CG3 184 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 ACAP3Q96P50 834 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 YBX2Q9Y2T7 364 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-207ENST00000453349 PTPRSQ13332 1948 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 A0A0B4J269 797 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 MEIS3P2A8K0S8 358 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 ABLIM1O14639 778 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 OGTO15294 1046 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 MBD3O95983 291 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 LDHAP00338 332 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 PTMSP20962 102 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 GATMP50440 423 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 OSTNP61366 133 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 SNRPFP62306 86 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 NOMO2Q5JPE7 1267 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 CLLU1OSQ5K130 101 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 SPOUT1Q5T280 376 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 ZNF658Q5TYW1 1059 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 KIAA0895Q8NCT3 520 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 MSTO1Q9BUK6 570 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 MRPL9Q9BYD2 267 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 GBP3Q9H0R5 595 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 CLSTN2Q9H4D0 955 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 TOPORSQ9NS56 1045 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 RNF19AQ9NV58 838 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 INPP5FQ9Y2H2 1132 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 STYXL1Q9Y6J8 313 aa15.96■□□□□ 0.15
NCKIPSD-207ENST00000453349 TTC3P53804 2025 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 PDE4DIPQ5VU43 2346 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 LCHNA4D1U4 455 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 SOX1O00570 391 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 GARTP22102 1010 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 RNASELQ05823 741 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 BMT2Q1RMZ1 405 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 PPP2R2DQ66LE6 453 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 ARMCX5Q6P1M9 558 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 SLC39A4Q6P5W5 647 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 GPT2Q8TD30 523 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 FAM193BQ96PV7 902 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 RPS6KC1Q96S38 1066 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 GAD1Q99259 594 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 HAPLN2Q9GZV7 340 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 NUP62CLQ9H1M0 184 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 RC3H2Q9HBD1 1191 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 AAASQ9NRG9 546 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 TYW1Q9NV66 732 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 KLK14Q9P0G3 267 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 KIAA1468Q9P260 1216 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 CGNQ9P2M7 1197 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 AGO2Q9UKV8 859 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 RWDD3Q9Y3V2 267 aa15.95■□□□□ 0.14
NCKIPSD-207ENST00000453349 LINC01553A4QN01 128 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 ARL5CA6NH57 179 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 TISP43B9A030 160 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 KIAA0391O15091 583 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 RECQL4O94761 1208 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 CLTAP09496 248 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms