RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 SPPL3Q8TCT6 385 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 POF1BQ8WVV4 589 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 BICD1Q96G01 975 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 TMEM169Q96HH4 297 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 ACO2Q99798 780 aaKnown RBP17.02■□□□□ 0.32
VPS8-213ENST00000453056 PANK2Q9BZ23 570 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 SCAND2PQ9GZW5 306 aaPredicted RBP17.02■□□□□ 0.32
VPS8-213ENST00000453056 GBP3Q9H0R5 595 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 TNMDQ9H2S6 317 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 MAGEF1Q9HAY2 307 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 THEGQ9P2T0 379 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 SEL1LQ9UBV2 794 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 PCDHA7Q9UN72 937 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 LZTS1Q9Y250 596 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 CUL9Q8IWT3 2517 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 TTC28Q96AY4 2481 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 A0A087X0B3 334 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 TRAK2O60296 914 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 RECQL4O94761 1208 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 CSPG5O95196 566 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 POMCP01189 267 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 EDN1P05305 212 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 AMPD3Q01432 767 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 PLCB3Q01970 1234 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 GRIK3Q13003 919 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 BMS1Q14692 1282 aaKnown RBP17.01■□□□□ 0.31
VPS8-213ENST00000453056 PDE12Q6L8Q7 609 aaKnown RBP17.01■□□□□ 0.31
VPS8-213ENST00000453056 MPZL3Q6UWV2 235 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 ZPBP2Q6X784 338 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 DYMQ7RTS9 669 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 TAS1R3Q7RTX0 852 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 HAUS6Q7Z4H7 955 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.01■□□□□ 0.31
VPS8-213ENST00000453056 SLC39A11Q8N1S5 342 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 LEO1Q8WVC0 666 aaPredicted RBP17.01■□□□□ 0.31
VPS8-213ENST00000453056 DDX12PQ92771 950 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 KCNN1Q92952 543 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 DHX58Q96C10 678 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 TMEM175Q9BSA9 504 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 TCHPQ9BT92 498 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 CCDC94Q9BW85 323 aaPredicted RBP17.01■□□□□ 0.31
VPS8-213ENST00000453056 TARS2Q9BW92 718 aaKnown RBP17.01■□□□□ 0.31
VPS8-213ENST00000453056 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 TLR9Q9NR96 1032 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 USP20Q9Y2K6 914 aa17.01■□□□□ 0.31
VPS8-213ENST00000453056 MYMKA6NI61 221 aa17■□□□□ 0.31
VPS8-213ENST00000453056 NR1I2O75469 434 aa17■□□□□ 0.31
VPS8-213ENST00000453056 TOM1L1O75674 476 aa17■□□□□ 0.31
VPS8-213ENST00000453056 AKAP5P24588 427 aa17■□□□□ 0.31
VPS8-213ENST00000453056 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
VPS8-213ENST00000453056 PBX3P40426 434 aa17■□□□□ 0.31
VPS8-213ENST00000453056 SCNN1GP51170 649 aa17■□□□□ 0.31
VPS8-213ENST00000453056 NOLC1Q14978 699 aaKnown RBP eCLIP17■□□□□ 0.31
VPS8-213ENST00000453056 RESP18Q5W5W9 173 aa17■□□□□ 0.31
VPS8-213ENST00000453056 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
VPS8-213ENST00000453056 ZFP42Q96MM3 310 aa17■□□□□ 0.31
VPS8-213ENST00000453056 CDT1Q9H211 546 aa17■□□□□ 0.31
VPS8-213ENST00000453056 ENTPD7Q9NQZ7 604 aa17■□□□□ 0.31
VPS8-213ENST00000453056 SNTG2Q9NY99 539 aa17■□□□□ 0.31
VPS8-213ENST00000453056 ANKFY1Q9P2R3 1169 aa17■□□□□ 0.31
VPS8-213ENST00000453056 STK39Q9UEW8 545 aa17■□□□□ 0.31
VPS8-213ENST00000453056 COG5Q9UP83 839 aa17■□□□□ 0.31
VPS8-213ENST00000453056 HNRNPDLO14979 420 aaKnown RBP16.99■□□□□ 0.31
VPS8-213ENST00000453056 NCK2O43639 380 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 GALTP07902 379 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 MCF2P10911 925 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 IDEP14735 1019 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 MATR3P43243 847 aaKnown RBP eCLIP16.99■□□□□ 0.31
VPS8-213ENST00000453056 LIG4P49917 911 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
VPS8-213ENST00000453056 E2F4Q16254 413 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 TCEAL5Q5H9L2 206 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 SFR1Q86XK3 245 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 CCDC65Q8IXS2 484 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 MICAL1Q8TDZ2 1067 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 TOPORSQ9NS56 1045 aaPredicted RBP16.99■□□□□ 0.31
VPS8-213ENST00000453056 KLK14Q9P0G3 267 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 GDAQ9Y2T3 454 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 UNC80Q8N2C7 3258 aa16.99■□□□□ 0.31
VPS8-213ENST00000453056 REV3LO60673 3130 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 FSD2A1L4K1 749 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 POLR2DO15514 142 aaKnown RBP16.98■□□□□ 0.31
VPS8-213ENST00000453056 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
VPS8-213ENST00000453056 PROZP22891 400 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 DNAJB1P25685 340 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 GRM5P41594 1212 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 SLC11A1P49279 550 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 AAK1Q2M2I8 961 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 HLA-CQ95604 372 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 HVCN1Q96D96 273 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 DNAJC19Q96DA6 116 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 IGSF21Q96ID5 467 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 MRPL44Q9H9J2 332 aaKnown RBP16.98■□□□□ 0.31
VPS8-213ENST00000453056 PTPRHQ9HD43 1115 aa16.98■□□□□ 0.31
VPS8-213ENST00000453056 NGRNQ9NPE2 291 aaKnown RBP16.98■□□□□ 0.31
VPS8-213ENST00000453056 KBTBD4Q9NVX7 518 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms