RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 SYCE3A1L190 88 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ANKRD63C9JTQ0 380 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ENPP3O14638 875 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 KIAA0391O15091 583 aaKnown RBP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 FGBP02675 491 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 MCF2P10911 925 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 SKIP12755 728 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ADSSP30520 456 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 FAM189BP81408 668 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 LRRC63Q05C16 580 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 MYBPC2Q14324 1141 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 STX1AQ16623 288 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 TMEM132AQ24JP5 1023 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 TCTN1Q2MV58 587 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 EEF1DP3Q658K8 133 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 LINC01599Q8WXQ3 324 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 SEMA6BQ9H3T3 888 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 AGPAT3Q9NRZ7 376 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 FAM105AQ9NUU6 356 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 C9IYK1 514 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 CALUO43852 315 aaPredicted RBP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 CCDC192P0DO97 292 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ACRP10323 421 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 CCNE1P24864 410 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 MAGEA10P43363 369 aaPredicted RBP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 EPHB4P54760 987 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 MLLT1Q03111 559 aaPredicted RBP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 TYRO3Q06418 890 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 NOLC1Q14978 699 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 EDRF1Q3B7T1 1238 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ZNF568Q3ZCX4 644 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 TMEM240Q5SV17 173 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 SLC9A9Q8IVB4 645 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 P2RX5Q93086 422 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ZBTB45Q96K62 511 aaPredicted RBP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 HAPLN2Q9GZV7 340 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 CDT1Q9H211 546 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 IKZF4Q9H2S9 585 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
SCN9A-204ENST00000452182 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
SCN9A-204ENST00000452182 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 BICDL2A1A5D9 508 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 TISP43B9A030 160 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 FAM189A1O60320 539 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 EOMESO95936 686 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 LDHAP00338 332 aaKnown RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 POU5F1Q01860 360 aaKnown RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 PAK1Q13153 545 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 HSP90AA2PQ14568 343 aaPredicted RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 KYAT1Q16773 422 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 ARMCX5Q6P1M9 558 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 ZNF365Q70YC5 407 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 MRPL10Q7Z7H8 261 aaKnown RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 CDR2LQ86X02 465 aaPredicted RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 CRIPAKQ8N1N5 446 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 NELFBQ8WX92 580 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 HERVK_113Q902F9 699 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 GDF15Q99988 308 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.65□□□□□ -0.386e-9■□□□□ 10.8
SCN9A-204ENST00000452182 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
SCN9A-204ENST00000452182 DMAC2Q9NW81 257 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 RWDD2AQ9UIY3 292 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 PCDHB2Q9Y5E7 798 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 TTC3P53804 2025 aa12.65□□□□□ -0.38
SCN9A-204ENST00000452182 H0YGN5 161 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 OGTO15294 1046 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 NPTXRO95502 500 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 RPL13P26373 211 aaKnown RBP12.64□□□□□ -0.39
SCN9A-204ENST00000452182 GRM5P41594 1212 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 TTI2Q6NXR4 508 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 ZNF598Q86UK7 904 aaKnown RBP12.64□□□□□ -0.39
SCN9A-204ENST00000452182 ECHDC2Q86YB7 292 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
SCN9A-204ENST00000452182 HACE1Q8IYU2 909 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 SMG8Q8ND04 991 aaKnown RBP12.64□□□□□ -0.39
SCN9A-204ENST00000452182 FBXL18Q96ME1 805 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 TSG101Q99816 390 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 CBWD1Q9BRT8 395 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 MSTO1Q9BUK6 570 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 AGO2Q9UKV8 859 aaKnown RBP12.64□□□□□ -0.39
SCN9A-204ENST00000452182 IPPQ9Y573 584 aa12.64□□□□□ -0.39
SCN9A-204ENST00000452182 CAVIN2O95810 425 aa12.63□□□□□ -0.39
SCN9A-204ENST00000452182 NR3C1P04150 777 aa12.63□□□□□ -0.39
SCN9A-204ENST00000452182 BMP8BP34820 402 aa12.63□□□□□ -0.39
SCN9A-204ENST00000452182 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCN9A-204ENST00000452182 PMS1P54277 932 aaKnown RBP12.63□□□□□ -0.39
SCN9A-204ENST00000452182 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
SCN9A-204ENST00000452182 FKBP3Q00688 224 aaKnown RBP12.63□□□□□ -0.39
SCN9A-204ENST00000452182 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
SCN9A-204ENST00000452182 ANKRD40Q6AI12 368 aa12.63□□□□□ -0.39
SCN9A-204ENST00000452182 KLHL10Q6JEL2 608 aa12.63□□□□□ -0.39
SCN9A-204ENST00000452182 OTOP2Q7RTS6 562 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms