RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 NGRNQ9NPE2 291 aaKnown RBP9.62□□□□□ -0.87
RFX3-209ENST00000451859 LRWD1Q9UFC0 647 aa9.62□□□□□ -0.87
RFX3-209ENST00000451859 LZTS1Q9Y250 596 aa9.62□□□□□ -0.87
RFX3-209ENST00000451859 USP15Q9Y4E8 981 aaPredicted RBP9.62□□□□□ -0.87
RFX3-209ENST00000451859 IPPQ9Y573 584 aa9.62□□□□□ -0.87
RFX3-209ENST00000451859 PCDHB6Q9Y5E3 794 aa9.62□□□□□ -0.87
RFX3-209ENST00000451859 VWA8A3KMH1 1905 aa9.62□□□□□ -0.87
RFX3-209ENST00000451859 CNTNAP2Q9UHC6 1331 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 PP2D1A8MPX8 630 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 H3BQV1 296 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 ZNF623O75123 536 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 DDHD2O94830 711 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 CXCL14O95715 111 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 SRGAP2BP0DMP2 458 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 ARF4P18085 180 aaPredicted RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 NCLP19338 710 aaKnown RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 SP100P23497 879 aaPredicted RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 GJB2P29033 226 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 MLH1P40692 756 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 SLC11A1P49279 550 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 TOB1P50616 345 aaPredicted RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 NCBP1Q09161 790 aaKnown RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 PTGDRQ13258 359 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 ZRSR1Q15695 479 aaKnown RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 HAUS3Q68CZ6 603 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 MRPL10Q7Z7H8 261 aaKnown RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 ZBTB8OSQ8IWT0 167 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 VPS52Q8N1B4 723 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 SMRP1Q8NCR6 262 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 SMG8Q8ND04 991 aaKnown RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 SNX29Q8TEQ0 813 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 BSNDQ8WZ55 320 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 TMX3Q96JJ7 454 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 ZFP42Q96MM3 310 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 NACC1Q96RE7 527 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 GAD1Q99259 594 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 POLR3CQ9BUI4 534 aaPredicted RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 CSRNP2Q9H175 543 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 NXF3Q9H4D5 531 aaKnown RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 CDH22Q9UJ99 828 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 PRG3Q9Y2Y8 225 aaPredicted RBP9.61□□□□□ -0.87
RFX3-209ENST00000451859 KIF3AQ9Y496 699 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 ANK1P16157 1881 aa9.61□□□□□ -0.87
RFX3-209ENST00000451859 C2orf71A6NGG8 1288 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 ARL5CA6NH57 179 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 C2CD2LO14523 706 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 GALTP07902 379 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 AKAP5P24588 427 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 U2AF2P26368 475 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■■□□□ 13.6
RFX3-209ENST00000451859 RPA1P27694 616 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 AXLP30530 894 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 TRAPPC10P48553 1259 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 SCNN1GP51170 649 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 COASYQ13057 564 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 ORC2Q13416 577 aaPredicted RBP9.6□□□□□ -0.87
RFX3-209ENST00000451859 BMS1Q14692 1282 aaKnown RBP9.6□□□□□ -0.87
RFX3-209ENST00000451859 ECM1Q16610 540 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 AMHR2Q16671 573 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 TMEM31Q5JXX7 168 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 ANKRD54Q6NXT1 300 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 C4orf32Q8N8J7 132 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 MCPH1Q8NEM0 835 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 TATDN2Q93075 761 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 IGSF21Q96ID5 467 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 RPGRIP1Q96KN7 1286 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 POP1Q99575 1024 aaKnown RBP9.6□□□□□ -0.87
RFX3-209ENST00000451859 CDCA3Q99618 268 aaPredicted RBP9.6□□□□□ -0.87
RFX3-209ENST00000451859 LRFN3Q9BTN0 628 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 KIFC3Q9BVG8 833 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 ZBP1Q9H171 429 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 BHMT2Q9H2M3 363 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 DDX19AQ9NUU7 478 aaKnown RBP9.6□□□□□ -0.87
RFX3-209ENST00000451859 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 PRKAG3Q9UGI9 489 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 PARP2Q9UGN5 583 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 MUTYHQ9UIF7 546 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 DBR1Q9UK59 544 aaKnown RBP9.6□□□□□ -0.87
RFX3-209ENST00000451859 KIAA1024Q9UPX6 916 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 SMC3Q9UQE7 1217 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 USP20Q9Y2K6 914 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 FAN1Q9Y2M0 1017 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 HCFC2Q9Y5Z7 792 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 TECTAO75443 2155 aa9.6□□□□□ -0.87
RFX3-209ENST00000451859 FSD2A1L4K1 749 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 PI4K2BG5E9Z4 385 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 NRP1O14786 923 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 DCXO43602 365 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 CLASP2O75122 1294 aaKnown RBP9.59□□□□□ -0.87
RFX3-209ENST00000451859 EYA4O95677 639 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 WEE2P0C1S8 567 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 MYBP10242 640 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 XRCC6P12956 609 aaKnown RBP eCLIP9.59□□□□□ -0.87
RFX3-209ENST00000451859 EPCAMP16422 314 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 CDC25AP30304 524 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 OR1G1P47890 313 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 SLC27A1Q6PCB7 646 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 SYCE2Q6PIF2 218 aa9.59□□□□□ -0.87
RFX3-209ENST00000451859 HACE1Q8IYU2 909 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms