RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 OS9Q13438 667 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 SMAD4Q13485 552 aaKnown RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 MORC3Q14149 939 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 SLC9A5Q14940 896 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CFAP100Q494V2 611 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 TNNI3KQ59H18 835 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 DNAJC21Q5F1R6 531 aaKnown RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 EMC10Q5UCC4 262 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZNF662Q6ZS27 426 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 UBE3BQ7Z3V4 1068 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CNPY4Q8N129 248 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 TRIML1Q8N9V2 468 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 KBTBD3Q8NAB2 608 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZBTB8AQ96BR9 441 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC51Q96ER9 411 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 EDC3Q96F86 508 aaKnown RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 TSPAN17Q96FV3 270 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 SH3GL2Q99962 352 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 MTA3Q9BTC8 594 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 TEX13AQ9BXU3 409 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CXorf56Q9H5V9 222 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 BICC1Q9H694 974 aaKnown RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 NCOA5Q9HCD5 579 aaKnown RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 GPR108Q9NPR9 543 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 RAI14Q9P0K7 980 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 MYO1AQ9UBC5 1043 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 NUDT5Q9UKK9 219 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 HPCAL4Q9UM19 191 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAP3K2Q9Y2U5 619 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 FPGT-TNNI3KV9GXZ4 949 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 GRIN2DO15399 1336 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 ITIH6Q6UXX5 1313 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CPDO75976 1380 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 MST1RQ04912 1400 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 MYO5AQ9Y4I1 1855 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 A0A0U1RQJ8 604 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC196A0A1B0GTZ2 297 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 C7orf72A4D263 438 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 AKR1B15C9JRZ8 316 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 MFAP3LO75121 409 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 FSBPO95073 299 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 SERPINC1P01008 464 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CHGBP05060 677 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ERCC5P28715 1186 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 HNRNPH1P31943 449 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 SYKP43405 635 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ADKP55263 362 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 EIF6P56537 245 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 GJA9P57773 515 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ANTXR2P58335 489 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCT2P78371 535 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 SLC7A5Q01650 507 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 MTF1Q14872 753 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZRSR1Q15695 479 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZNF827Q17R98 1081 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 PROSER3Q2NL68 480 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 EPHA10Q5JZY3 1008 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC129Q6ZRS4 1044 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 TRAPPC11Q7Z392 1133 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZNF572Q7Z3I7 529 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 STK32CQ86UX6 486 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 MB21D2Q8IYB1 491 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ARHGEF39Q8N4T4 335 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 PRPF38AQ8NAV1 312 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 MLKLQ8NB16 471 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 AFAP1L1Q8TED9 768 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC12Q8WUD4 166 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ATRIPQ8WXE1 791 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CPA5Q8WXQ8 436 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 RUBCNQ92622 972 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZNF622Q969S3 477 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 DRC1Q96MC2 740 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CLIC6Q96NY7 704 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 PSMD1Q99460 953 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 LRRC2Q9BYS8 371 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 KLHL25Q9H0H3 589 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 SIL1Q9H173 461 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ACBD3Q9H3P7 528 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 DEF6Q9H4E7 631 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 FAM204AQ9H8W3 233 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 GPRC5CQ9NQ84 441 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 ADD3Q9UEY8 706 aaKnown RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAN1B1Q9UKM7 699 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 EFR3BQ9Y2G0 817 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 MYRFQ9Y2G1 1151 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 SUGT1Q9Y2Z0 365 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 CEP83Q9Y592 693 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 COL22A1Q8NFW1 1626 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 NID2Q14112 1375 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 TMEM2Q9UHN6 1383 aa4.63□□□□□ -1.67
HMGB3P22-202ENST00000451823 LRP6O75581 1613 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 C5P01031 1676 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 A0A0G2JLW4 131 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 NPHP3-ACAD11A0A0J9YXS1 232 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 A0A1W2PQH9 124 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC189A1A4V9 331 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CTAGE15A4D2H0 777 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CTAGE9A4FU28 777 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 SRRM3A6NNA2 597 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms