RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PARP1P09874 1014 aaKnown RBP9□□□□□ -0.97
LINC01961-201ENST00000449954 FSHRP23945 695 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 SLC26A2P50443 739 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 KIZQ2M2Z5 673 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 CCDC178Q5BJE1 867 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 SH3PXD2AQ5TCZ1 1133 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 PLPPR4Q7Z2D5 763 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 KIAA0319LQ8IZA0 1049 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 BCL7CQ8WUZ0 217 aaPredicted RBP9□□□□□ -0.97
LINC01961-201ENST00000449954 DNASE1L2Q92874 299 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 BBC3Q96PG8 261 aaPredicted RBP9□□□□□ -0.97
LINC01961-201ENST00000449954 SEC62Q99442 399 aaKnown RBP9□□□□□ -0.97
LINC01961-201ENST00000449954 OSMRQ99650 979 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 VN1R3Q9BXE9 311 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 NT5C3AQ9H0P0 336 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 VAT1LQ9HCJ6 419 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 FKBPLQ9UIM3 349 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 COL1A2P08123 1366 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 CHURC1-FNTBB4DL54 471 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 TEX28O15482 410 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 PPP1R11O60927 126 aaPredicted RBP8.99□□□□□ -0.97
LINC01961-201ENST00000449954 TOP3BO95985 862 aaKnown RBP8.99□□□□□ -0.97
LINC01961-201ENST00000449954 SSBP05455 408 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC01961-201ENST00000449954 GALTP07902 379 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 CSRP1P21291 193 aaKnown RBP8.99□□□□□ -0.97
LINC01961-201ENST00000449954 KLRC1P26715 233 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 RFC5P40937 340 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 GRM5P41594 1212 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 FNTBP49356 437 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 RNASELQ05823 741 aaKnown RBP8.99□□□□□ -0.97
LINC01961-201ENST00000449954 SRSF5Q13243 272 aaKnown RBP8.99□□□□□ -0.97
LINC01961-201ENST00000449954 NR5A1Q13285 461 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 COL28A1Q2UY09 1125 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 ZMYM1Q5SVZ6 1142 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 TRIM46Q7Z4K8 759 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 MTMR8Q96EF0 704 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 RPS6KC1Q96S38 1066 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 PCYT2Q99447 389 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 EDEM2Q9BV94 578 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 KAT14Q9H8E8 782 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 VPS45Q9NRW7 570 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 DACT1Q9NYF0 836 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 MYO18BQ8IUG5 2567 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 HECTD1Q9ULT8 2610 aa8.99□□□□□ -0.97
LINC01961-201ENST00000449954 SOD2P04179 222 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 HOXA6P31267 233 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 MPLP40238 635 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 RAP1GAPP47736 663 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 AK2P54819 239 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 SATB1Q01826 763 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 TROAPQ12815 778 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 ALX1Q15699 326 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 C19orf48Q6RUI8 117 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 GLB1LQ6UWU2 654 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 VASH1Q7L8A9 365 aaPredicted RBP8.98□□□□□ -0.97
LINC01961-201ENST00000449954 IQCA1Q86XH1 822 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 SPEM1Q8N4L4 309 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 ST13P5Q8NFI4 369 aaPredicted RBP8.98□□□□□ -0.97
LINC01961-201ENST00000449954 ESR2Q92731 530 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 FGF13Q92913 245 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 ARHGAP9Q9BRR9 750 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 LRRCC1Q9C099 1032 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 ADAMTS10Q9H324 1103 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 NRDE2Q9H7Z3 1164 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 JPH1Q9HDC5 661 aaPredicted RBP8.98□□□□□ -0.97
LINC01961-201ENST00000449954 HEBP1Q9NRV9 189 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 TBC1D13Q9NVG8 400 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 NDRG2Q9UN36 371 aaKnown RBP8.98□□□□□ -0.97
LINC01961-201ENST00000449954 F5P12259 2224 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 ZMYM6O95789 1325 aa8.98□□□□□ -0.97
LINC01961-201ENST00000449954 SPAG17Q6Q759 2223 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 SHISA7A6NL88 538 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 C2CD2LO14523 706 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 MAFGO15525 162 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 HBP1O60381 514 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 ATP9AO75110 1047 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 GPR32O75388 356 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 ECI2O75521 394 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 SKIP12755 728 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 TIMP2P16035 220 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 SLC11A1P49279 550 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 STAT5BP51692 787 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 MTMR1Q13613 665 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 NOMO2Q5JPE7 1267 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 CACNA2D4Q7Z3S7 1137 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 WDR5BQ86VZ2 330 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 KXD1Q9BQD3 176 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 HERC2P3Q9BVR0 1158 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 C1QTNF2Q9BXJ5 285 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 RNF41Q9H4P4 317 aaPredicted RBP8.97□□□□□ -0.97
LINC01961-201ENST00000449954 RXFP1Q9HBX9 757 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 SLC9A2Q9UBY0 812 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 SPTA1P02549 2419 aa8.97□□□□□ -0.97
LINC01961-201ENST00000449954 MTCL1Q9Y4B5 1905 aaKnown RBP8.96□□□□□ -0.97
LINC01961-201ENST00000449954 K7ESF4 209 aa8.96□□□□□ -0.98
LINC01961-201ENST00000449954 HYAL3O43820 417 aaPredicted RBP8.96□□□□□ -0.98
LINC01961-201ENST00000449954 HNRNPA1P09651 372 aaKnown RBP eCLIP8.96□□□□□ -0.98
LINC01961-201ENST00000449954 EIF4BP23588 611 aaKnown RBP8.96□□□□□ -0.98
LINC01961-201ENST00000449954 GLUD2P49448 558 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms