RNA–Protein interactions for RNA: ENST00000448282.6

SMIM8-205, Transcript of small integral membrane protein 8, humanhuman

TSL 1 (best)

Gene SMIM8, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-205ENST00000448282 MGAT3Q09327 533 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 KRT31Q15323 416 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 SURF1Q15526 300 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 SNRNP35Q16560 246 aaKnown RBP12.92□□□□□ -0.34
SMIM8-205ENST00000448282 AMHR2Q16671 573 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 SLC39A4Q6P5W5 647 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 SLC27A1Q6PCB7 646 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 IRF2BP1Q8IU81 584 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 DHX38Q92620 1227 aaKnown RBP12.92□□□□□ -0.34
SMIM8-205ENST00000448282 FBXL18Q96ME1 805 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 NOC4LQ9BVI4 516 aaKnown RBP12.92□□□□□ -0.34
SMIM8-205ENST00000448282 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 PTPRHQ9HD43 1115 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 AGPAT5Q9NUQ2 364 aa12.92□□□□□ -0.34
SMIM8-205ENST00000448282 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMIM8-205ENST00000448282 B4GALT5O43286 388 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 CHRNA1P02708 482 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 CKBP12277 381 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 ZSCAN20P17040 1043 aaPredicted RBP12.91□□□□□ -0.34
SMIM8-205ENST00000448282 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
SMIM8-205ENST00000448282 COPB1P53618 953 aaKnown RBP12.91□□□□□ -0.34
SMIM8-205ENST00000448282 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
SMIM8-205ENST00000448282 PAK2Q13177 524 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 FBXO47Q5MNV8 452 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 LRRC8DQ7L1W4 858 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 ZBTB33Q86T24 672 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 TRIM59Q8IWR1 403 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 MRFAP1L1Q96HT8 127 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
SMIM8-205ENST00000448282 FAM213AQ9BRX8 229 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
SMIM8-205ENST00000448282 PDZD7Q9H5P4 517 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 IFNKQ9P0W0 207 aa12.91□□□□□ -0.34
SMIM8-205ENST00000448282 PIN4Q9Y237 131 aaKnown RBP12.91□□□□□ -0.34
SMIM8-205ENST00000448282 A0A1B0GTH6 734 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 GOLGA6L6A8MZA4 724 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 TISP43B9A030 160 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 PES1O00541 588 aaKnown RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 N4BP1O75113 896 aaKnown RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 ADCY5O95622 1261 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 CLTAP09496 248 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 IQCF3P0C7M6 154 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 SKIP12755 728 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 ZNF75DP51815 510 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 TLE2Q04725 743 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 CETN1Q12798 172 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 BFSP1Q12934 665 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 TRIM60Q495X7 471 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 VWA3BQ502W6 1294 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 ZNF618Q5T7W0 954 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 TCERG1LQ5VWI1 586 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 DIS3LQ8TF46 1054 aaKnown RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 TMEM40Q8WWA1 233 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 WNT8BQ93098 351 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 SAAL1Q96ER3 474 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 CDT1Q9H211 546 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 IKZF4Q9H2S9 585 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 TAB2Q9NYJ8 693 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 ST3GAL5Q9UNP4 418 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 ATP11BQ9Y2G3 1177 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
SMIM8-205ENST00000448282 FRMPD3Q5JV73 1810 aa12.9□□□□□ -0.34
SMIM8-205ENST00000448282 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 LGALS16A8MUM7 142 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 IL18RAPO95256 599 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 AFPP02771 609 aaKnown RBP12.89□□□□□ -0.35
SMIM8-205ENST00000448282 CDC25BP30305 580 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 HOXA11P31270 313 aaPredicted RBP12.89□□□□□ -0.35
SMIM8-205ENST00000448282 GTF2H1P32780 548 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 CASP4P49662 377 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 RAB27AP51159 221 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 VAMP7P51809 220 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 AP3M2P53677 418 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
SMIM8-205ENST00000448282 NFX1Q12986 1120 aaKnown RBP12.89□□□□□ -0.35
SMIM8-205ENST00000448282 DCAF17Q5H9S7 520 aaPredicted RBP12.89□□□□□ -0.35
SMIM8-205ENST00000448282 FAM228AQ86W67 206 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 CBWD2Q8IUF1 395 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 CD302Q8IX05 232 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 FNBP1Q96RU3 617 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 TSPAN18Q96SJ8 248 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 XPO4Q9C0E2 1151 aaKnown RBP12.89□□□□□ -0.35
SMIM8-205ENST00000448282 VPS16Q9H269 839 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 NDST4Q9H3R1 872 aa12.89□□□□□ -0.35
SMIM8-205ENST00000448282 HIPK3Q9H422 1215 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms