RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 MEIS1O00470 390 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 CAPN9O14815 690 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 BAG3O95817 575 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 T-ENOLP0DO92 83 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 CYP11B2P19099 503 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 GSTT1P30711 240 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 CDR2Q01850 454 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 ZNF746Q6NUN9 644 aaPredicted RBP17.14■□□□□ 0.33
CNOT3-204ENST00000447684 PPP1R21Q6ZMI0 780 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 RFX8Q6ZV50 586 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 CPNE8Q86YQ8 564 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 FAM84BQ96KN1 310 aaPredicted RBP17.14■□□□□ 0.33
CNOT3-204ENST00000447684 AAASQ9NRG9 546 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 ATMINO43313 823 aaPredicted RBP17.14■□□□□ 0.33
CNOT3-204ENST00000447684 SPOPO43791 374 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 DCTN3O75935 186 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 COMTP21964 271 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 ANXA13P27216 316 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 KRT17Q04695 432 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 DYNC1I2Q13409 638 aaKnown RBP17.14■□□□□ 0.33
CNOT3-204ENST00000447684 KNOP1Q1ED39 458 aaKnown RBP17.14■□□□□ 0.33
CNOT3-204ENST00000447684 DSTYKQ6XUX3 929 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 SFR1Q86XK3 245 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
CNOT3-204ENST00000447684 SLC30A5Q8TAD4 765 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 SLC35C1Q96A29 364 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 ZSWIM1Q9BR11 485 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 IKZF4Q9H2S9 585 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 ZFP69BQ9UJL9 534 aa17.14■□□□□ 0.33
CNOT3-204ENST00000447684 POTEFA5A3E0 1075 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 NR3C1P04150 777 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 HSPA6P17066 643 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 CTNNA2P26232 953 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 STAT3P40763 770 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 WDR4P57081 412 aaKnown RBP17.13■□□□□ 0.33
CNOT3-204ENST00000447684 CLUL1Q15846 466 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 POTEEQ6S8J3 1075 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 MIGA2Q7L4E1 593 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 BTBD6Q96KE9 485 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 C9orf72Q96LT7 481 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 OCEL1Q9H607 264 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 CHCHD3Q9NX63 227 aaKnown RBP17.13■□□□□ 0.33
CNOT3-204ENST00000447684 USP20Q9Y2K6 914 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 TTC4O95801 387 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 YARSP54577 528 aaKnown RBP17.13■□□□□ 0.33
CNOT3-204ENST00000447684 PABPC4Q13310 644 aaKnown RBP eCLIP17.13■□□□□ 0.332e-10■■■■□ 21.2
CNOT3-204ENST00000447684 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 C12orf60Q5U649 245 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 CYP4F22Q6NT55 531 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 TRAPPC9Q96Q05 1148 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 MAST2Q6P0Q8 1798 aa17.13■□□□□ 0.33
CNOT3-204ENST00000447684 CALUO43852 315 aaPredicted RBP17.12■□□□□ 0.33
CNOT3-204ENST00000447684 CREB3O43889 395 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 NTSR2O95665 410 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 KCNA1Q09470 495 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 RNF207Q6ZRF8 634 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 PPFIBP2Q8ND30 876 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 NRG4Q8WWG1 115 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 BICD1Q96G01 975 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 BCL9O00512 1426 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 ANKRD62A6NC57 917 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 FAM47DPA6NHR8 397 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 GCNT3O95395 438 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 LMNAP02545 664 aaKnown RBP17.12■□□□□ 0.33
CNOT3-204ENST00000447684 SCNN1BP51168 640 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 KPNB1Q14974 876 aaKnown RBP17.12■□□□□ 0.33
CNOT3-204ENST00000447684 ZRSR2Q15696 482 aaKnown RBP17.12■□□□□ 0.33
CNOT3-204ENST00000447684 CYFIP1Q7L576 1253 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 MTDHQ86UE4 582 aaKnown RBP17.12■□□□□ 0.33
CNOT3-204ENST00000447684 KIAA0825Q8IV33 1275 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 SYCP3Q8IZU3 236 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 HAS1Q92839 578 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 BCAS3Q9H6U6 928 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 UBN1Q9NPG3 1134 aa17.12■□□□□ 0.33
CNOT3-204ENST00000447684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.334e-7■■■■■ 46.6
CNOT3-204ENST00000447684 EDIL3O43854 480 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 TJP3O95049 919 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
CNOT3-204ENST00000447684 GSTA2P09210 222 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 SLC13A5Q86YT5 568 aaPredicted RBP17.11■□□□□ 0.33
CNOT3-204ENST00000447684 ZC3H3Q8IXZ2 948 aaKnown RBP17.11■□□□□ 0.33
CNOT3-204ENST00000447684 SCYL3Q8IZE3 742 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 ANKRD35Q8N283 1001 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 SLC20A1Q8WUM9 679 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 ATG4AQ8WYN0 398 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 STMN2Q93045 179 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 NDNQ99608 321 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
CNOT3-204ENST00000447684 MIF4GDA9UHW6 222 aaKnown RBP17.11■□□□□ 0.33
CNOT3-204ENST00000447684 CLDN3O15551 220 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms