RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SEPT6Q14141 434 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 PTGISQ16647 500 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 LRRC24Q50LG9 513 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 COLEC12Q5KU26 742 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 WIPI1Q5MNZ9 446 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-205ENST00000447267 STPG1Q5TH74 334 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 SCARA3Q6AZY7 606 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 LAIR1Q6GTX8 287 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 TTBK2Q6IQ55 1244 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 SV2BQ7L1I2 683 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 RIOX2Q8IUF8 465 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 CCDC144CPQ8IYA2 1237 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 MB21D1Q8N884 522 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 TDRD5Q8NAT2 981 aaKnown RBP6.1□□□□□ -1.43
SDCBP-205ENST00000447267 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 POF1BQ8WVV4 589 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 RSAD2Q8WXG1 361 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 IL17RAQ96F46 866 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 FGD4Q96M96 766 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 PLEKHF1Q96S99 279 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 WNT10AQ9GZT5 417 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.1□□□□□ -1.43
SDCBP-205ENST00000447267 FBXO4Q9UKT5 387 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 RAB23Q9ULC3 237 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 DUSP12Q9UNI6 340 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 GFRA2O00451 464 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 FLOT1O75955 427 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 LRIG2O94898 1065 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 CKBP12277 381 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 STAT3P40763 770 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 RIPK4P57078 832 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 METTL24Q5JXM2 366 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 MEI1Q5TIA1 1274 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 SLC23A3Q6PIS1 610 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 FAM133AQ8N9E0 248 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 FAM168AQ92567 244 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 BORCS6Q96GS4 357 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 DUSP9Q99956 384 aaKnown RBP6.09□□□□□ -1.43
SDCBP-205ENST00000447267 IFIH1Q9BYX4 1025 aaKnown RBP6.09□□□□□ -1.43
SDCBP-205ENST00000447267 KCNK12Q9HB15 430 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 SEMA3GQ9NS98 782 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 WNT16Q9UBV4 365 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 GTF2IRD1Q9UHL9 959 aa6.09□□□□□ -1.43
SDCBP-205ENST00000447267 CACNA1IQ9P0X4 2223 aa6.09□□□□□ -1.44
SDCBP-205ENST00000447267 ATAD5Q96QE3 1844 aa6.09□□□□□ -1.44
SDCBP-205ENST00000447267 DNAJC25-GNG10A0A024R161 153 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 GPR75-ASB3A0A0A6YYF3 556 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-205ENST00000447267 A0A1W2PRG0 241 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-205ENST00000447267 LRP3O75074 770 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 MMP3P08254 477 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 HOXB7P09629 217 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 LIMK1P53667 647 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 FZD5Q13467 585 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 ZNF618Q5T7W0 954 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 EEPD1Q7L9B9 569 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 DZIP1Q86YF9 867 aaKnown RBP6.08□□□□□ -1.44
SDCBP-205ENST00000447267 FOXP4Q8IVH2 680 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-205ENST00000447267 C12orf76Q8N812 135 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-205ENST00000447267 CAGE1Q8TC20 777 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 ZNF507Q8TCN5 953 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 NELL1Q92832 810 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 MIPEPQ99797 713 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 MTG1Q9BT17 334 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-205ENST00000447267 CYP26B1Q9NR63 512 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 GINM1Q9NU53 330 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 ABCF2Q9UG63 623 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 PALD1Q9ULE6 856 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 MTF2Q9Y483 593 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-205ENST00000447267 AKAP13Q12802 2813 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 LAMA5O15230 3695 aa6.08□□□□□ -1.44
SDCBP-205ENST00000447267 TICRRQ7Z2Z1 1910 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 ITPR3Q14573 2671 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 MROH7-TTC4A0A0A0MT08 1334 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 PRPF40AO75400 957 aaKnown RBP6.07□□□□□ -1.44
SDCBP-205ENST00000447267 PDE8BO95263 885 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 POU3F2P20265 443 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-205ENST00000447267 CNTN2Q02246 1040 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 IKZF1Q13422 519 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 KCNC3Q14003 757 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 ZNF124Q15973 351 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 DUSP6Q16828 381 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 PRAMEF13Q5VWM6 474 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 NFRKBQ6P4R8 1299 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 TEX11Q8IYF3 940 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 SPICE1Q8N0Z3 855 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 ZNF384Q8TF68 577 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 HSPA12BQ96MM6 686 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 MYL10Q9BUA6 226 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 SMOC1Q9H4F8 434 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 ATP13A1Q9HD20 1204 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 FBXO28Q9NVF7 368 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 SAP30BPQ9UHR5 308 aaKnown RBP6.07□□□□□ -1.44
SDCBP-205ENST00000447267 CTNND2Q9UQB3 1225 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 MAPK8IP1Q9UQF2 711 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms