RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 WEE2P0C1S8 567 aa22.93■■□□□ 1.26
SDC1-205ENST00000447124 PRPHP41219 470 aa22.93■■□□□ 1.26
SDC1-205ENST00000447124 NAMPTP43490 491 aa22.93■■□□□ 1.26
SDC1-205ENST00000447124 TPRNQ4KMQ1 711 aa22.93■■□□□ 1.26
SDC1-205ENST00000447124 EEF1DP3Q658K8 133 aa22.93■■□□□ 1.26
SDC1-205ENST00000447124 KCNK18Q7Z418 384 aa22.93■■□□□ 1.26
SDC1-205ENST00000447124 DEPTORQ8TB45 409 aa22.93■■□□□ 1.26
SDC1-205ENST00000447124 LAD1O00515 517 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 SOD2P04179 222 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 PRKCBP05771 671 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 LIG1P18858 919 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 PRPF4BQ13523 1007 aaKnown RBP22.92■■□□□ 1.26
SDC1-205ENST00000447124 MAPK6Q16659 721 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 RARS2Q5T160 578 aaKnown RBP22.92■■□□□ 1.26
SDC1-205ENST00000447124 DTHD1Q6ZMT9 781 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 HACE1Q8IYU2 909 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 TMEM87AQ8NBN3 555 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 RABGGTAQ92696 567 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 EDAQ92838 391 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 HERC2P3Q9BVR0 1158 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 SNTG2Q9NY99 539 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 KIF3AQ9Y496 699 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 STK24Q9Y6E0 443 aa22.92■■□□□ 1.26
SDC1-205ENST00000447124 ITIH3Q06033 890 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 RILPL1Q5EBL4 403 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 NT5DC1Q5TFE4 455 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 KIAA0319Q5VV43 1072 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 KRT79Q5XKE5 535 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 DAW1Q8N136 415 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 RAB34Q9BZG1 259 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 POMKQ9H5K3 350 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 UPF2Q9HAU5 1272 aaKnown RBP22.91■■□□□ 1.26
SDC1-205ENST00000447124 MRPL17Q9NRX2 175 aaKnown RBP22.91■■□□□ 1.26
SDC1-205ENST00000447124 CACNG4Q9UBN1 327 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 STK39Q9UEW8 545 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 DNM3Q9UQ16 869 aa22.91■■□□□ 1.26
SDC1-205ENST00000447124 C2CD2LO14523 706 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 N4BP3O15049 544 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 SP100P23497 879 aaPredicted RBP22.9■■□□□ 1.26
SDC1-205ENST00000447124 KLRC2P26717 231 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 MCM2P49736 904 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 CLCN4P51793 760 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 ATP2C1P98194 919 aaPredicted RBP22.9■■□□□ 1.26
SDC1-205ENST00000447124 PPP2R5AQ15172 486 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 CES5AQ6NT32 575 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 KIFAP3Q92845 792 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 IFT74Q96LB3 600 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 PNMA5Q96PV4 448 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 RPS6KC1Q96S38 1066 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 COLEC11Q9BWP8 271 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 GPR62Q9BZJ7 368 aa22.9■■□□□ 1.26
SDC1-205ENST00000447124 RINT1Q6NUQ1 792 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 C1orf186Q6ZWK4 172 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 PPFIBP1Q86W92 1011 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 FBXL18Q96ME1 805 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 PAAF1Q9BRP4 392 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 RUSC1Q9BVN2 902 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 EMILIN2Q9BXX0 1053 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 CHST7Q9NS84 486 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 DZANK1Q9NVP4 752 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 SMC3Q9UQE7 1217 aa22.89■■□□□ 1.25
SDC1-205ENST00000447124 H3BQV1 296 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 PTGESO14684 152 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 TEX28O15482 410 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 ZXDAP98168 799 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 GRIK3Q13003 919 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 MAPK7Q13164 816 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 TMC5Q6UXY8 1006 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 HFE2Q6ZVN8 426 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 B3GALT6Q96L58 329 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 RXFP1Q9HBX9 757 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 MYO10Q9HD67 2058 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 ZMYM2Q9UBW7 1377 aa22.88■■□□□ 1.25
SDC1-205ENST00000447124 HIP1RO75146 1068 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 MTHFRP42898 656 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 NPTX2P47972 431 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 EFNA5P52803 228 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 PEX3P56589 373 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 DSG1Q02413 1049 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 TMEM132AQ24JP5 1023 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 ATAT1Q5SQI0 421 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 HYIQ5T013 277 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 LARP1BQ659C4 914 aaKnown RBP22.87■■□□□ 1.25
SDC1-205ENST00000447124 CABP7Q86V35 215 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 NECTIN4Q96NY8 510 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 HCN4Q9Y3Q4 1203 aa22.87■■□□□ 1.25
SDC1-205ENST00000447124 SFI1A8K8P3 1242 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 C2CD4DB7Z1M9 353 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 K7ERI5 159 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 NR1I2O75469 434 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 RECQL4O94761 1208 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 URODP06132 367 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 GLUD2P49448 558 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 ZRSR1Q15695 479 aaKnown RBP22.86■■□□□ 1.25
SDC1-205ENST00000447124 NAB2Q15742 525 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 KIAA1841Q6NSI8 718 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 FUT10Q6P4F1 479 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 TRIM67Q6ZTA4 783 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 TAS1R3Q7RTX0 852 aa22.86■■□□□ 1.25
SDC1-205ENST00000447124 PLIN2Q99541 437 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms