RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 AP3M2P53677 418 aa9.59□□□□□ -0.88
FXR1-203ENST00000445140 NOLC1Q14978 699 aaKnown RBP eCLIP9.59□□□□□ -0.88
FXR1-203ENST00000445140 UBXN11Q5T124 520 aa9.59□□□□□ -0.88
FXR1-203ENST00000445140 ATF7IP2Q5U623 682 aa9.59□□□□□ -0.88
FXR1-203ENST00000445140 CNKSR3Q6P9H4 555 aa9.59□□□□□ -0.88
FXR1-203ENST00000445140 C11orf57Q6ZUT1 292 aaPredicted RBP9.59□□□□□ -0.88
FXR1-203ENST00000445140 DHX40Q8IX18 779 aaKnown RBP9.59□□□□□ -0.88
FXR1-203ENST00000445140 NLRP4Q96MN2 994 aa9.59□□□□□ -0.88
FXR1-203ENST00000445140 FAM49AQ9H0Q0 323 aaPredicted RBP9.59□□□□□ -0.88
FXR1-203ENST00000445140 HIPK3Q9H422 1215 aa9.59□□□□□ -0.88
FXR1-203ENST00000445140 UBN1Q9NPG3 1134 aa9.59□□□□□ -0.88
FXR1-203ENST00000445140 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.88
FXR1-203ENST00000445140 FNDC1Q4ZHG4 1894 aaPredicted RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 TTC3P53804 2025 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 SFI1A8K8P3 1242 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 OGTO15294 1046 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 PRPF6O94906 941 aaKnown RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 NR3C1P04150 777 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 EDN1P05305 212 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 ARF4P18085 180 aaPredicted RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 ADSSP30520 456 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 ANO6Q4KMQ2 910 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 COL13A1Q5TAT6 717 aaPredicted RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 SARM1Q6SZW1 724 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 GLIS3Q8NEA6 775 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 VTI1AQ96AJ9 217 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 VWCEQ96DN2 955 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 FAM124BQ9H5Z6 455 aaPredicted RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 LIMA1Q9UHB6 759 aaKnown RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 FSD2A1L4K1 749 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 P4HA2O15460 535 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 RPS6KA5O75582 802 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 ERLIN2O94905 339 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 IL18RAPO95256 599 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 EOMESO95936 686 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 LIG4P49917 911 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 RAD51AP2Q09MP3 1159 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 PAK2Q13177 524 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 KIZQ2M2Z5 673 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 ZC2HC1CQ53FD0 456 aaPredicted RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 ANKRD40Q6AI12 368 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 ZNF598Q86UK7 904 aaKnown RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 KSR1Q8IVT5 923 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 BRSK2Q8IWQ3 736 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 XXYLT1Q8NBI6 393 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 IPO4Q8TEX9 1081 aaKnown RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 SEPT8Q92599 483 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 OSMRQ99650 979 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 CDT1Q9H211 546 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 HSD3B7Q9H2F3 369 aa9.58□□□□□ -0.88
FXR1-203ENST00000445140 CPSF3Q9UKF6 684 aaKnown RBP9.58□□□□□ -0.88
FXR1-203ENST00000445140 ABHD14A-ACY1A0A1B0GW23 586 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 GTPBP10A4D1E9 387 aaKnown RBP9.57□□□□□ -0.88
FXR1-203ENST00000445140 CETN3O15182 167 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 NBNO60934 754 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 CLTAP09496 248 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 SRGAP2CP0DJJ0 459 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 ZNF165P49910 485 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 PPIGQ13427 754 aaKnown RBP eCLIP9.57□□□□□ -0.88
FXR1-203ENST00000445140 PSMD6Q15008 389 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 USP37Q86T82 979 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 HACE1Q8IYU2 909 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 RPUSD2Q8IZ73 545 aaKnown RBP9.57□□□□□ -0.88
FXR1-203ENST00000445140 GPD1LQ8N335 351 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 TMEM199Q8N511 208 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 ADPGKQ9BRR6 497 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 TMX1Q9H3N1 280 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 ASB7Q9H672 318 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 CDHR5Q9HBB8 845 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 ST3GAL5Q9UNP4 418 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 CTNND2Q9UQB3 1225 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 TDRD15B5MCY1 1934 aaKnown RBP9.57□□□□□ -0.88
FXR1-203ENST00000445140 A0A0U1RQF3 1178 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 C9IYK1 514 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 INO80B-WBP1J3KQ70 363 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 HNRNPDLO14979 420 aaKnown RBP9.57□□□□□ -0.88
FXR1-203ENST00000445140 STX10O60499 249 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 PQBP1O60828 265 aaKnown RBP9.57□□□□□ -0.88
FXR1-203ENST00000445140 RASIP1Q5U651 963 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 ALKAL1Q6UXT8 129 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 INTS8Q75QN2 995 aaKnown RBP9.57□□□□□ -0.88
FXR1-203ENST00000445140 CATSPER4Q7RTX7 472 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 HPS3Q969F9 1004 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 KIFC3Q9BVG8 833 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 CBX8Q9HC52 389 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 IL23AQ9NPF7 189 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 TMEM39AQ9NV64 488 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 HSPBP1Q9NZL4 362 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 PADI3Q9ULW8 664 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 GIT1Q9Y2X7 761 aa9.57□□□□□ -0.88
FXR1-203ENST00000445140 TRIM43BA6NCK2 446 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 ANKRD63C9JTQ0 380 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 KCNE1P15382 129 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 PSMC2P35998 433 aaKnown RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 PMS1P54277 932 aaKnown RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 MAEAQ7L5Y9 396 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 TRIM59Q8IWR1 403 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 ERCC4Q92889 916 aaPredicted RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 TRIM43Q96BQ3 446 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms