RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 IL23AQ9NPF7 189 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 ANLNQ9NQW6 1124 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 NCDNQ9UBB6 729 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 PCDHA13Q9Y5I0 950 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 ZMYM3Q14202 1370 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 FAM171A2A8MVW0 826 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 MARCH6O60337 910 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 STC2O76061 302 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 GASTP01350 101 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 CT47B1P0C2W7 299 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 ECHS1P30084 290 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 CRHR1P34998 444 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 DSC2Q02487 901 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 NXNQ6DKJ4 435 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 TCTN3Q6NUS6 607 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 GLB1LQ6UWU2 654 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 USP45Q70EL2 814 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 C14orf80Q86SX3 495 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 TRMT2AQ8IZ69 625 aaKnown RBP5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 OR5M3Q8NGP4 307 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 AIFM3Q96NN9 605 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 DMRTA2Q96SC8 542 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 NELFAQ9H3P2 528 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 MSL2Q9HCI7 577 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 SAP30BPQ9UHR5 308 aaKnown RBP5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 PCDHB1Q9Y5F3 818 aa5.93□□□□□ -1.46
HMGB3P6-201ENST00000444896 A0A1W2PRX2 142 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 NRP1O14786 923 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 FOXS1O43638 330 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 FOXD2O60548 495 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 AMY1AP04745 511 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 MLC1Q15049 377 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 ATAT1Q5SQI0 421 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 PRAMEF14Q5SWL7 426 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 FAM111BQ6SJ93 734 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 B3GNT9Q6UX72 402 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 FUKQ8N0W3 1084 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 MYO1HQ8N1T3 1032 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 PQLC1Q8N2U9 271 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 ZGPATQ8N5A5 531 aaKnown RBP5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 MAGEB6Q8N7X4 407 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 MDM1Q8TC05 714 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 KAT5Q92993 513 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 HPS3Q969F9 1004 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 HDAC10Q969S8 669 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 CEP95Q96GE4 821 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 C7orf25Q9BPX7 421 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 TCF25Q9BQ70 676 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 PDCD2LQ9BRP1 358 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 LDAHQ9H6V9 325 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 PLA2G3Q9NZ20 509 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 RCAN3Q9UKA8 241 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 ZFR2Q9UPR6 939 aaKnown RBP5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 ATRNL1Q5VV63 1379 aa5.92□□□□□ -1.46
HMGB3P6-201ENST00000444896 B8ZZF3 427 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 K7ESM1 405 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 ENDOD1O94919 500 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 ITGB3P05106 788 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 GUCY1A2P33402 732 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 RPS19P39019 145 aaKnown RBP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 NPEPPSP55786 919 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 PER3P56645 1201 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 ATP8B2P98198 1209 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 APBA1Q02410 837 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 FOXL1Q12952 345 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 TARDBPQ13148 414 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 MRPL49Q13405 166 aaKnown RBP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 GTF2H3Q13889 308 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 ZNF267Q14586 743 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 GRM7Q14831 915 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 MFSD14BQ5SR56 506 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 GJC2Q5T442 439 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 CXorf57Q6NSI4 855 aaKnown RBP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 RHOT1Q8IXI2 618 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 GIMAP8Q8ND71 665 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 FBXO18Q8NFZ0 1043 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 CXorf38Q8TB03 319 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 STON2Q8WXE9 905 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 TMEM176AQ96HP8 235 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 LRGUKQ96M69 825 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 KCNH6Q9H252 994 aa5.91□□□□□ -1.46
HMGB3P6-201ENST00000444896 AP1G1O43747 822 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 RAD17O75943 681 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 GZMKP49863 264 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 FAM214AQ32MH5 1076 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 IFIT1BQ5T764 474 aaKnown RBP5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 MIGA2Q7L4E1 593 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 ZNF572Q7Z3I7 529 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 CHST13Q8NET6 341 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 DNERQ8NFT8 737 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 TTC8Q8TAM2 541 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 SLC35G2Q8TBE7 412 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 RAB24Q969Q5 203 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 CLIP3Q96DZ5 547 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 IL17RAQ96F46 866 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 BORCS6Q96GS4 357 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 LOXL4Q96JB6 756 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 MRGPRX4Q96LA9 322 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms