RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 MASP1P48740 699 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 SCAND1P57086 179 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS50-206ENST00000443443 MRGPRGQ86SM5 289 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 CMIPQ8IY22 773 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 OR52N2Q8NGI0 321 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 NDC1Q9BTX1 674 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 RPTORQ8N122 1335 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 ANKRD62A6NC57 917 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 AKR1B10O60218 316 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 BRINP1O60477 761 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 CPEP16870 476 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 CNGA1P29973 690 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
VPS50-206ENST00000443443 PTTG1IPP53801 180 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 MEF2AQ02078 507 aaPredicted RBP6.29□□□□□ -1.4
VPS50-206ENST00000443443 FSTL1Q12841 308 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 TIGD2Q4W5G0 525 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 METTL24Q5JXM2 366 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 LAIR1Q6GTX8 287 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 PDZD4Q76G19 769 aaPredicted RBP6.29□□□□□ -1.4
VPS50-206ENST00000443443 DOK3Q7L591 496 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 MRGPREQ86SM8 312 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 ULK2Q8IYT8 1036 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 PAWRQ96IZ0 340 aaKnown RBP6.29□□□□□ -1.4
VPS50-206ENST00000443443 KCNH6Q9H252 994 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 GPRC5DQ9NZD1 345 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 TRPM5Q9NZQ8 1165 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 C11orf21Q9P2W6 132 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 CLCA2Q9UQC9 943 aa6.29□□□□□ -1.4
VPS50-206ENST00000443443 TMEM191CA6NGB0 347 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 GRXCR1A8MXD5 290 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 TMEM127O75204 238 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 GASTP01350 101 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 PTPN7P35236 360 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 TMPRSS15P98073 1019 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 PTPAQ15257 358 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 ANKS6Q68DC2 871 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 EFCAB12Q6NXP0 572 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 PROKR1Q8TCW9 393 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 PRRX2Q99811 253 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 QRSL1Q9H0R6 528 aaKnown RBP6.28□□□□□ -1.4
VPS50-206ENST00000443443 BCCIPQ9P287 314 aaKnown RBP eCLIP6.28□□□□□ -1.4
VPS50-206ENST00000443443 FZD1Q9UP38 647 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 CADPSQ9ULU8 1353 aa6.28□□□□□ -1.4
VPS50-206ENST00000443443 TRIM24O15164 1050 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 PHF2O75151 1096 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 ABHD16AO95870 558 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 ITGB1P05556 798 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 LAG3P18627 525 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 NR4A1P22736 598 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 STAT4Q14765 748 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 LY6G5CQ5SRR4 150 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 KCNV1Q6PIU1 500 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 LDLRAD3Q86YD5 345 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 ZNF480Q8WV37 535 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 AUTS2Q8WXX7 1259 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 RIN2Q8WYP3 895 aaPredicted RBP6.27□□□□□ -1.41
VPS50-206ENST00000443443 TFAP2CQ92754 450 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 DCLRE1CQ96SD1 692 aaKnown RBP6.27□□□□□ -1.41
VPS50-206ENST00000443443 ZNF768Q9H5H4 540 aaKnown RBP6.27□□□□□ -1.41
VPS50-206ENST00000443443 VTA1Q9NP79 307 aa6.27□□□□□ -1.41
VPS50-206ENST00000443443 TBKBP1A7MCY6 615 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 LEFTY2O00292 366 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 PER3P56645 1201 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 RNASE9P60153 205 aaKnown RBP6.26□□□□□ -1.41
VPS50-206ENST00000443443 NHLH2Q02577 135 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 FAM180AQ6UWF9 173 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 NOL8Q76FK4 1167 aaKnown RBP6.26□□□□□ -1.41
VPS50-206ENST00000443443 VRK3Q8IV63 474 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
VPS50-206ENST00000443443 LILRA3Q8N6C8 439 aaPredicted RBP6.26□□□□□ -1.41
VPS50-206ENST00000443443 OR10H5Q8NGA6 315 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 LENG9Q96B70 501 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 ZBTB21Q9ULJ3 1066 aa6.26□□□□□ -1.41
VPS50-206ENST00000443443 AHRRA9YTQ3 701 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 B5MCH6 92 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 OVOL3O00110 214 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 PPFIA4O75335 1185 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 MTHFD2P13995 350 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 MRPS9P82933 396 aaKnown RBP6.25□□□□□ -1.41
VPS50-206ENST00000443443 FAPQ12884 760 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 TOR2AQ5JU69 321 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 PRAMEF14Q5SWL7 426 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 BTNL9Q6UXG8 535 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 GPRIN1Q7Z2K8 1008 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 GDF7Q7Z4P5 450 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 RNF169Q8NCN4 708 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 REPS2Q8NFH8 660 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 GPR156Q8NFN8 814 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 LMBR1Q8WVP7 490 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 FATE1Q969F0 183 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 AHCYL2Q96HN2 611 aaKnown RBP6.25□□□□□ -1.41
VPS50-206ENST00000443443 PHACTR3Q96KR7 559 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 UHRF1Q96T88 793 aaPredicted RBP6.25□□□□□ -1.41
VPS50-206ENST00000443443 IFT122Q9HBG6 1241 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 C14orf119Q9NWQ9 140 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 DMRT1Q9Y5R6 373 aa6.25□□□□□ -1.41
VPS50-206ENST00000443443 FOXN1O15353 648 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms