RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 OFD1O75665 1012 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
USP39-205ENST00000442708 RPN1P04843 607 aaKnown RBP17.57■□□□□ 0.4
USP39-205ENST00000442708 MYL1P05976 194 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 ITGA4P13612 1032 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 SCP2P22307 547 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 AKAP5P24588 427 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 POSTNQ15063 836 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 MPZL3Q6UWV2 235 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 Q7L0L9 218 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 TMEM192Q8IY95 271 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 SLC17A8Q8NDX2 589 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 BICD1Q96G01 975 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 TIGD1Q96MW7 591 aa17.57■□□□□ 0.4
USP39-205ENST00000442708 TRIM6Q9C030 488 aaPredicted RBP17.57■□□□□ 0.4
USP39-205ENST00000442708 MRPL42Q9Y6G3 142 aaKnown RBP17.57■□□□□ 0.4
USP39-205ENST00000442708 ZMYM2Q9UBW7 1377 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 MEFVO15553 781 aaPredicted RBP17.56■□□□□ 0.4
USP39-205ENST00000442708 TOM1L1O75674 476 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 STK4Q13043 487 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 BTG3Q14201 252 aaPredicted RBP17.56■□□□□ 0.4
USP39-205ENST00000442708 DCAF4L1Q3SXM0 396 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 ZNF568Q3ZCX4 644 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 PPP2R2DQ66LE6 453 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 KANK3Q6NY19 840 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 CMTR2Q8IYT2 770 aaKnown RBP17.56■□□□□ 0.4
USP39-205ENST00000442708 KIAA0895Q8NCT3 520 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 HVCN1Q96D96 273 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 PGBD4Q96DM1 585 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 GBP4Q96PP9 640 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 TMEM117Q9H0C3 514 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 CERS4Q9HA82 394 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 SLC28A3Q9HAS3 691 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
USP39-205ENST00000442708 SNTG2Q9NY99 539 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 KLK14Q9P0G3 267 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 ANKFY1Q9P2R3 1169 aa17.56■□□□□ 0.4
USP39-205ENST00000442708 TDRD15B5MCY1 1934 aaKnown RBP17.55■□□□□ 0.4
USP39-205ENST00000442708 EPOPA6NHQ4 379 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 HNRNPDLO14979 420 aaKnown RBP17.55■□□□□ 0.4
USP39-205ENST00000442708 B4GALT3O60512 393 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 MCF2P10911 925 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 HARSP12081 509 aaKnown RBP17.55■□□□□ 0.4
USP39-205ENST00000442708 LIG4P49917 911 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 MCL1Q07820 350 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 SEZ6Q53EL9 994 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 GSTCDQ8NEC7 633 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 SCFD1Q8WVM8 642 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 ZFP42Q96MM3 310 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 ACCSQ96QU6 501 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 ADPGKQ9BRR6 497 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 C17orf80Q9BSJ5 609 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 ZNF576Q9H609 170 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 CWH43Q9H720 699 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 RSAD1Q9HA92 442 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 TYW1Q9NV66 732 aaKnown RBP17.55■□□□□ 0.4
USP39-205ENST00000442708 EXOC1Q9NV70 894 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 MIOSQ9NXC5 875 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 INPP5FQ9Y2H2 1132 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 PCDHB13Q9Y5F0 798 aa17.55■□□□□ 0.4
USP39-205ENST00000442708 COL4A4P53420 1690 aaPredicted RBP17.55■□□□□ 0.4
USP39-205ENST00000442708 CITO14578 2027 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 A0A0B4J269 797 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 ARL5CA6NH57 179 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 HOXA2O43364 376 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 FAM189A1O60320 539 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 KINO60870 393 aaKnown RBP17.54■□□□□ 0.4
USP39-205ENST00000442708 RECQL4O94761 1208 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 RHOBTB3O94955 611 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 ADSSP30520 456 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 ABCD1P33897 745 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 MLH1P40692 756 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 GRM5P41594 1212 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 OSTNP61366 133 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 ALCAMQ13740 583 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 NOLC1Q14978 699 aaKnown RBP eCLIP17.54■□□□□ 0.4
USP39-205ENST00000442708 NOMO2Q5JPE7 1267 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 ZBTB41Q5SVQ8 909 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 FIBCD1Q8N539 461 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 CLP1Q92989 425 aaKnown RBP17.54■□□□□ 0.4
USP39-205ENST00000442708 FAM161BQ96MY7 647 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 GAD1Q99259 594 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 PARP2Q9UGN5 583 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 PLAGL2Q9UPG8 496 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 GDAQ9Y2T3 454 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 PCDHA5Q9Y5H7 936 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 STYXL1Q9Y6J8 313 aa17.54■□□□□ 0.4
USP39-205ENST00000442708 ANK1P16157 1881 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 PDCD11Q14690 1871 aaKnown RBP17.53■□□□□ 0.4
USP39-205ENST00000442708 INPPL1O15357 1258 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 EIF3DO15371 548 aaKnown RBP eCLIP17.53■□□□□ 0.4
USP39-205ENST00000442708 CLDN3O15551 220 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 TNFSF9P41273 254 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 ERVK-21P61565 698 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 KCNB1Q14721 858 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 GPR153Q6NV75 609 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms