RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZNF148Q9UQR1 794 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 TRAF3IP3Q9Y228 551 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 BCL9O00512 1426 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 PITPNM2Q9BZ72 1349 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 GDF11O95390 407 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 BAG2O95816 211 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 EPHB2P29323 1055 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 MXI1P50539 228 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 NPEPPSP55786 919 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 MIGA2Q7L4E1 593 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 SYT2Q8N9I0 419 aaPredicted RBP9.67□□□□□ -0.86
COPB1-202ENST00000439561 SLCO1B3Q9NPD5 702 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 ADAM22Q9P0K1 906 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 ASTN1O14525 1302 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 MYO3BQ8WXR4 1341 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 CFAP69A5D8W1 941 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 PPP1R11O60927 126 aaPredicted RBP9.67□□□□□ -0.86
COPB1-202ENST00000439561 SGPL1O95470 568 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 CALCAP01258 141 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 GNAT1P11488 350 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 OVGP1Q12889 678 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 ZNF268Q14587 947 aaPredicted RBP9.67□□□□□ -0.86
COPB1-202ENST00000439561 FAM182BQ5T319 152 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 DAB2IPQ5VWQ8 1189 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 TRMT10CQ7L0Y3 403 aaKnown RBP9.67□□□□□ -0.86
COPB1-202ENST00000439561 TBC1D22AQ8WUA7 517 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 SNF8Q96H20 258 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 KLF6Q99612 283 aaPredicted RBP9.67□□□□□ -0.86
COPB1-202ENST00000439561 AMNQ9BXJ7 453 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 RTFDC1Q9BY42 306 aaPredicted RBP9.67□□□□□ -0.86
COPB1-202ENST00000439561 MYLK2Q9H1R3 596 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 GRHL1Q9NZI5 618 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 ZFP69BQ9UJL9 534 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 STXBP5LQ9Y2K9 1186 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 MYH7BA7E2Y1 1941 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 FER1L4A9Z1Z3 1794 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 TISP43B9A030 160 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 LGR5O75473 907 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 PIAS1O75925 651 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 RPA1P27694 616 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 RCN2Q14257 317 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 RRP1BQ14684 758 aaKnown RBP9.67□□□□□ -0.86
COPB1-202ENST00000439561 RASIP1Q5U651 963 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 IZUMO3Q5VZ72 239 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 TLDC1Q6P9B6 456 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 CLEC4GQ6UXB4 293 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 SLFN11Q7Z7L1 901 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 TEKT4Q8WW24 435 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 BICD1Q96G01 975 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 GBP5Q96PP8 586 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 EBF2Q9HAK2 575 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 UBN1Q9NPG3 1134 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 CHST7Q9NS84 486 aa9.67□□□□□ -0.86
COPB1-202ENST00000439561 SLC16A3O15427 465 aaKnown RBP9.66□□□□□ -0.86
COPB1-202ENST00000439561 ENTPD5O75356 428 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 TROVE2P10155 538 aaKnown RBP eCLIP9.66□□□□□ -0.86
COPB1-202ENST00000439561 PLS3P13797 630 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 GAP43P17677 238 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 VCAM1P19320 739 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 HOXA7P31268 230 aaPredicted RBP9.66□□□□□ -0.86
COPB1-202ENST00000439561 SPARCL1Q14515 664 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 BTNL9Q6UXG8 535 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 PASD1Q8IV76 773 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 PDCD7Q8N8D1 485 aaKnown RBP9.66□□□□□ -0.86
COPB1-202ENST00000439561 DNAJC9Q8WXX5 260 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 CYTH2Q99418 400 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 WNT8AQ9H1J5 351 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 ADAM7Q9H2U9 754 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 DNAJC18Q9H819 358 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 SIX2Q9NPC8 291 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.66□□□□□ -0.86
COPB1-202ENST00000439561 CNOT7Q9UIV1 285 aaKnown RBP9.66□□□□□ -0.86
COPB1-202ENST00000439561 PHTF1Q9UMS5 762 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 NAALADL1Q9UQQ1 740 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 IKBKGQ9Y6K9 419 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 CCDC189A1A4V9 331 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 ATP2A1O14983 1001 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 CDH16O75309 829 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 ANXA13P27216 316 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 MARSP56192 900 aaKnown RBP9.66□□□□□ -0.86
COPB1-202ENST00000439561 KLC1Q07866 573 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 BFSP1Q12934 665 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 PHLDB3Q6NSJ2 640 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 RINT1Q6NUQ1 792 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 SERPINB12Q96P63 405 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 ROPN1BQ9BZX4 212 aaPredicted RBP9.66□□□□□ -0.86
COPB1-202ENST00000439561 GLT8D2Q9H1C3 349 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 ROPN1Q9HAT0 212 aaPredicted RBP9.66□□□□□ -0.86
COPB1-202ENST00000439561 AGPAT3Q9NRZ7 376 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 FAM47DPA6NHR8 397 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 PI4K2BG5E9Z4 385 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 CD58P19256 250 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 CDR2Q01850 454 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 SP4Q02446 784 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 BNIP1Q12981 228 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 RIPK1Q13546 671 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 CCDC62Q6P9F0 684 aa9.66□□□□□ -0.86
COPB1-202ENST00000439561 ECHDC2Q86YB7 292 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms