RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 PTPN21Q16825 1174 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 EARS2Q5JPH6 523 aaKnown RBP10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 ATAT1Q5SQI0 421 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 KANK3Q6NY19 840 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 FAM173BQ6P4H8 233 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 ZNF280BQ86YH2 543 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 NOSTRINQ8IVI9 506 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 C4orf19Q8IY42 314 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 SLFN12Q8IYM2 578 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 FBXL6Q8N531 539 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 RNF149Q8NC42 400 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 BCL7CQ8WUZ0 217 aaPredicted RBP10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 CHAMP1Q96JM3 812 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 RIPOR3Q96MK2 946 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 CCDC43Q96MW1 224 aaKnown RBP10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 NECTIN4Q96NY8 510 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 ZBP1Q9H171 429 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 DHX33Q9H6R0 707 aaKnown RBP10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 MINDY3Q9H8M7 445 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 RSAD1Q9HA92 442 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 AGPAT5Q9NUQ2 364 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 DZANK1Q9NVP4 752 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 DNAJB4Q9UDY4 337 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 RIF1Q5UIP0 2472 aaKnown RBP10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 ERLIN2O94905 339 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 POMCP01189 267 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 ALDH2P05091 517 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 ITGA4P13612 1032 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 KLRC2P26717 231 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 NCBP1Q09161 790 aaKnown RBP10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 GIT2Q14161 759 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 CALCRLQ16602 461 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 AGMOQ6ZNB7 445 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 MRPL10Q7Z7H8 261 aaKnown RBP10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 CABP7Q86V35 215 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 KREMEN2Q8NCW0 462 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 MTRQ99707 1265 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 EIF2AK1Q9BQI3 630 aaKnown RBP10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 ADAM33Q9BZ11 813 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 POMKQ9H5K3 350 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 KANSL3Q9P2N6 904 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 DBR1Q9UK59 544 aaKnown RBP10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 FAN1Q9Y2M0 1017 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 PCDHGA10Q9Y5H3 936 aa10.21□□□□□ -0.77
AC011228.1-201ENST00000439027 WDFY4Q6ZS81 3184 aa10.21□□□□□ -0.78
AC011228.1-201ENST00000439027 C2CD4DB7Z1M9 353 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 INO80B-WBP1J3KQ70 363 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 C2CD2LO14523 706 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 GAS2O43903 313 aaKnown RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 B4GALT3O60512 393 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 DDHD2O94830 711 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 SLITRK3O94933 977 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 PRKCSHP14314 528 aaPredicted RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 NCLP19338 710 aaKnown RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 ATP2B1P20020 1258 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 HOXA11P31270 313 aaPredicted RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 AFF1P51825 1210 aaKnown RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 PTPN5P54829 565 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 DNM1Q05193 864 aaKnown RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 TFDP1Q14186 410 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 PTPN14Q15678 1187 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 UBXN11Q5T124 520 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 TMC5Q6UXY8 1006 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 PPFIBP1Q86W92 1011 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 TDRD5Q8NAT2 981 aaKnown RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 PRSS33Q8NF86 280 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 SLC22A17Q8WUG5 538 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 TNFRSF25Q93038 417 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 CPB2Q96IY4 423 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 ZNF396Q96N95 335 aaPredicted RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 TMEM175Q9BSA9 504 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 APOL6Q9BWW8 343 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 VN1R3Q9BXE9 311 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 EMILIN2Q9BXX0 1053 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 UBN1Q9NPG3 1134 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 CNTNAP2Q9UHC6 1331 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 PCDHA12Q9UN75 941 aa10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 PRG3Q9Y2Y8 225 aaPredicted RBP10.2□□□□□ -0.78
AC011228.1-201ENST00000439027 A0A087WWV3 80 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 NRP1O14786 923 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 TXKP42681 527 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 OR1G1P47890 313 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 PTENP60484 403 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 CEBPZQ03701 1054 aaKnown RBP10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 SPIRE1Q08AE8 756 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 MXD4Q14582 209 aaPredicted RBP10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 KIAA1841Q6NSI8 718 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 NOTUMQ6P988 496 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 SMG8Q8ND04 991 aaKnown RBP10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 CNNM3Q8NE01 707 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 ASAP3Q8TDY4 903 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 ASIC4Q96FT7 647 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 GBP4Q96PP9 640 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 KLHL5Q96PQ7 755 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 GAD1Q99259 594 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 PRRX2Q99811 253 aa10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 EIF2AQ9BY44 585 aaKnown RBP10.19□□□□□ -0.78
AC011228.1-201ENST00000439027 TRIM6Q9C030 488 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms