RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 POSTNQ15063 836 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
SNRPB-202ENST00000438552 SLC39A4Q6P5W5 647 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 MPZL3Q6UWV2 235 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 ZPBP2Q6X784 338 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 ABI1Q8IZP0 508 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 CEP120Q8N960 986 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 PGBD4Q96DM1 585 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 CASD1Q96PB1 797 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 TMEM117Q9H0C3 514 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 TTYH1Q9H313 450 aaPredicted RBP17.71■□□□□ 0.43
SNRPB-202ENST00000438552 RSAD1Q9HA92 442 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 PTPRHQ9HD43 1115 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 EXOC1Q9NV70 894 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 INPP5FQ9Y2H2 1132 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 MRPL42Q9Y6G3 142 aaKnown RBP17.71■□□□□ 0.43
SNRPB-202ENST00000438552 TRIP11Q15643 1979 aa17.71■□□□□ 0.43
SNRPB-202ENST00000438552 PDCD11Q14690 1871 aaKnown RBP17.71■□□□□ 0.43
SNRPB-202ENST00000438552 ZMYM2Q9UBW7 1377 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 TISP43B9A030 160 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 KINO60870 393 aaKnown RBP17.7■□□□□ 0.42
SNRPB-202ENST00000438552 TOM1L1O75674 476 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 AKAP5P24588 427 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 ABCD1P33897 745 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.424e-9■■■■■ 27
SNRPB-202ENST00000438552 KMT5BQ4FZB7 885 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 ZNF697Q5TEC3 545 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 KANK3Q6NY19 840 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 Q7L0L9 218 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 FIBCD1Q8N539 461 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 FAM161BQ96MY7 647 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 TCHPQ9BT92 498 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 HAPLN2Q9GZV7 340 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 CERS4Q9HA82 394 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 MTUS1Q9ULD2 1270 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
SNRPB-202ENST00000438552 TMEM265A0A087WTH1 108 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 ANKRD63C9JTQ0 380 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 PRPF6O94906 941 aaKnown RBP17.69■□□□□ 0.42
SNRPB-202ENST00000438552 MLH1P40692 756 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 MATR3P43243 847 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNRPB-202ENST00000438552 AFF1P51825 1210 aaKnown RBP17.69■□□□□ 0.42
SNRPB-202ENST00000438552 ALCAMQ13740 583 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 GLB1LQ6UWU2 654 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 EPM2AIP1Q7L775 607 aaPredicted RBP17.69■□□□□ 0.42
SNRPB-202ENST00000438552 APBB1IPQ7Z5R6 666 aaPredicted RBP17.69■□□□□ 0.42
SNRPB-202ENST00000438552 HACE1Q8IYU2 909 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 ERCC4Q92889 916 aaPredicted RBP17.69■□□□□ 0.42
SNRPB-202ENST00000438552 CCDC34Q96HJ3 373 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 ACCSQ96QU6 501 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 C17orf80Q9BSJ5 609 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 ZNF576Q9H609 170 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 SLC39A2Q9NP94 309 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 SNTG2Q9NY99 539 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 ANK1P16157 1881 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 PLXNA4Q9HCM2 1894 aa17.69■□□□□ 0.42
SNRPB-202ENST00000438552 ATG2AQ2TAZ0 1938 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 OFD1O75665 1012 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 RECQL4O94761 1208 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 LINC00271P0C7V0 271 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 MCF2P10911 925 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 OSTNP61366 133 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 MCL1Q07820 350 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 SEZ6Q53EL9 994 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 STXBP4Q6ZWJ1 553 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 TMEM192Q8IY95 271 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 LRRC43Q8N309 656 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 ZFP42Q96MM3 310 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 KLK14Q9P0G3 267 aa17.68■□□□□ 0.42
SNRPB-202ENST00000438552 TRANK1O15050 2925 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 ARL5CA6NH57 179 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 EIF3DO15371 548 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNRPB-202ENST00000438552 CLDN3O15551 220 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 CTNNB1P35222 781 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 GRM5P41594 1212 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 NOMO2Q5JPE7 1267 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 GPR153Q6NV75 609 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 NELFCDQ8IXH7 590 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 THNSL1Q8IYQ7 743 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 SYCP3Q8IZU3 236 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 KIAA0895Q8NCT3 520 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 URGCPQ8TCY9 931 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 ARNTL2Q8WYA1 636 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 TGS1Q96RS0 853 aaKnown RBP17.67■□□□□ 0.42
SNRPB-202ENST00000438552 GAD1Q99259 594 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 MRPL9Q9BYD2 267 aaKnown RBP17.67■□□□□ 0.42
SNRPB-202ENST00000438552 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
SNRPB-202ENST00000438552 EXOC7Q9UPT5 735 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 GIT1Q9Y2X7 761 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 UBE4BO95155 1302 aa17.67■□□□□ 0.42
SNRPB-202ENST00000438552 EPOPA6NHQ4 379 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 RHOBTB3O94955 611 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 HOXD13P35453 343 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms