RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 CUL4BQ13620 913 aa12.57□□□□□ -0.4
SNHG3-202ENST00000437681 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
SNHG3-202ENST00000437681 URGCPQ8TCY9 931 aa12.57□□□□□ -0.4
SNHG3-202ENST00000437681 CLP1Q92989 425 aaKnown RBP12.57□□□□□ -0.4
SNHG3-202ENST00000437681 CLSTN2Q9H4D0 955 aa12.57□□□□□ -0.4
SNHG3-202ENST00000437681 GDPD2Q9HCC8 539 aa12.57□□□□□ -0.4
SNHG3-202ENST00000437681 AAASQ9NRG9 546 aa12.57□□□□□ -0.4
SNHG3-202ENST00000437681 LMCD1Q9NZU5 365 aa12.57□□□□□ -0.4
SNHG3-202ENST00000437681 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
SNHG3-202ENST00000437681 NLRC5Q86WI3 1866 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 NPHP3-ACAD11A0A0J9YXS1 232 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 C1RP00736 705 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.43e-26■■□□□ 13.5
SNHG3-202ENST00000437681 SKOR2Q2VWA4 1001 aaPredicted RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 ZNF658Q5TYW1 1059 aaPredicted RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 RBM43Q6ZSC3 357 aaKnown RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 DYMQ7RTS9 669 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 TET1Q8NFU7 2136 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 SMARCE1Q969G3 411 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 UROC1Q96N76 676 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 TOPORSQ9NS56 1045 aaPredicted RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 KIAA1671Q9BY89 1806 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 PDXKO00764 312 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 CLTAP09496 248 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 ITGA4P13612 1032 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 CYP3A5P20815 502 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 UBE3AQ05086 875 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 LRRC43Q8N309 656 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 P2RX5Q93086 422 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 CCDC94Q9BW85 323 aaPredicted RBP12.56□□□□□ -0.4
SNHG3-202ENST00000437681 PRDM16Q9HAZ2 1276 aa12.56□□□□□ -0.4
SNHG3-202ENST00000437681 A0A087WWV3 80 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 A0A0B4J269 797 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 OGTO15294 1046 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 NR1I2O75469 434 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 IL18RAPO95256 599 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 KCNE1P15382 129 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 LIG4P49917 911 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 MAEAQ7L5Y9 396 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 SMG8Q8ND04 991 aaKnown RBP12.55□□□□□ -0.4
SNHG3-202ENST00000437681 RNF19AQ9NV58 838 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 TRAF3IP3Q9Y228 551 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 IPPQ9Y573 584 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 LETM1O95202 739 aaPredicted RBP12.55□□□□□ -0.4
SNHG3-202ENST00000437681 IDEP14735 1019 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 LAG3P18627 525 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 POU3F3P20264 500 aaPredicted RBP12.55□□□□□ -0.4
SNHG3-202ENST00000437681 ERVK-21P61565 698 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 EDRF1Q3B7T1 1238 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 PDE12Q6L8Q7 609 aaKnown RBP12.55□□□□□ -0.4
SNHG3-202ENST00000437681 GLB1LQ6UWU2 654 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 ALKAL1Q6UXT8 129 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 ZC3H3Q8IXZ2 948 aaKnown RBP12.55□□□□□ -0.4
SNHG3-202ENST00000437681 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 SYAP1Q96A49 352 aaPredicted RBP12.55□□□□□ -0.4
SNHG3-202ENST00000437681 TYW1Q9NV66 732 aaKnown RBP12.55□□□□□ -0.4
SNHG3-202ENST00000437681 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
SNHG3-202ENST00000437681 CLDN3O15551 220 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 XPOTO43592 962 aaKnown RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 GCNT3O95395 438 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 LIG1P18858 919 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 PPM1AP35813 382 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 GRIK3Q13003 919 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 STIM1Q13586 685 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 DHX8Q14562 1220 aaKnown RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 KNOP1Q1ED39 458 aaKnown RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 DHTKD1Q96HY7 919 aaPredicted RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 FBXL18Q96ME1 805 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 CASD1Q96PB1 797 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 OSBPL7Q9BZF2 842 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 GBP3Q9H0R5 595 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 CDT1Q9H211 546 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 ASB7Q9H672 318 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 RSAD1Q9HA92 442 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 CNTN3Q9P232 1028 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 GINS2Q9Y248 185 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 TDRD15B5MCY1 1934 aaKnown RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 AFMP43652 599 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 YARSP54577 528 aaKnown RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 HS2ST1Q7LGA3 356 aa12.54□□□□□ -0.4
SNHG3-202ENST00000437681 CXXC1Q9P0U4 656 aaPredicted RBP12.54□□□□□ -0.4
SNHG3-202ENST00000437681 TMEM189-UBE2V1I3L0A0 370 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 TLL1O43897 1013 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 OFD1O75665 1012 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 MCM4P33991 863 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 AP3M2P53677 418 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 DEFB103AP81534 67 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms