RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 CDC42EP1Q00587 391 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 MTERF2Q49AM1 385 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 JAKMIP3Q5VZ66 844 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 FUT10Q6P4F1 479 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 RHPN2Q8IUC4 686 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 TEX2Q8IWB9 1127 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 KDF1Q8NAX2 398 aaPredicted RBP18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 INO80BQ9C086 356 aaPredicted RBP18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 IFT122Q9HBG6 1241 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 HCFC1R1Q9NWW0 138 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 TCEAL9Q9UHQ7 104 aa18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 MRPS17Q9Y2R5 130 aaKnown RBP18.36■□□□□ 0.53
HMGN1P19-201ENST00000436976 CCDC69A6NI79 296 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 WDR64B1ANS9 1081 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 CCL16O15467 120 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 PRC1O43663 620 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 STBD1O95210 358 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 SATB1Q01826 763 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 PRSS55Q6UWB4 352 aaPredicted RBP18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 GPR65Q8IYL9 337 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 FANCBQ8NB91 859 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 SMG8Q8ND04 991 aaKnown RBP18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 LENG9Q96B70 501 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 NLRP4Q96MN2 994 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 TMEM121BQ9BXQ6 578 aaPredicted RBP18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 DISC1Q9NRI5 854 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 SUCLA2Q9P2R7 463 aaPredicted RBP18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 ARID2Q68CP9 1835 aa18.35■□□□□ 0.53
HMGN1P19-201ENST00000436976 SOBPA7XYQ1 873 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 CHURC1-FNTBB4DL54 471 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 HNRNPA1P09651 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 CALM1P0DP23 149 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 CALM2P0DP24 149 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 CALM3P0DP25 149 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 FNTBP49356 437 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 SETQ01105 290 aaPredicted RBP18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 GAS6Q14393 721 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 SF3A2Q15428 464 aaKnown RBP18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 USP41Q3LFD5 358 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 CASC1Q6TDU7 716 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 ING5Q8WYH8 240 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 GAD1Q99259 594 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 NIFKQ9BYG3 293 aaKnown RBP18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 MINDY3Q9H8M7 445 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 SEPT9Q9UHD8 586 aaPredicted RBP18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 POLIQ9UNA4 740 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 ATG2BQ96BY7 2078 aa18.34■□□□□ 0.53
HMGN1P19-201ENST00000436976 FLNBO75369 2602 aaKnown RBP18.33■□□□□ 0.53
HMGN1P19-201ENST00000436976 ARL5CA6NH57 179 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 ECI2O75521 394 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 KCNK5O95279 499 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 C8AP07357 584 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 MLH1P40692 756 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 SCNN1GP51170 649 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 CCR3P51677 355 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 FUT2Q10981 343 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 AASDHQ4L235 1098 aaPredicted RBP18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 PRR16Q569H4 304 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 RTP2Q5QGT7 225 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 FAM160A2Q8N612 972 aaPredicted RBP18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 ZFP42Q96MM3 310 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 MTA3Q9BTC8 594 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 ITPR1Q14643 2758 aa18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 KIF26AQ9ULI4 1882 aaPredicted RBP18.33■□□□□ 0.52
HMGN1P19-201ENST00000436976 TRIP11Q15643 1979 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 FOXD2O60548 495 aaPredicted RBP18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 LIFRP42702 1097 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 PPP2R5DQ14738 602 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 PPM1LQ5SGD2 360 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 TANGO2Q6ICL3 276 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 MICU3Q86XE3 530 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 TMTC2Q8N394 836 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 RABGGTAQ92696 567 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 DNASE1L2Q92874 299 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 CLSTN3Q9BQT9 956 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 IER2Q9BTL4 223 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 LMAN1LQ9HAT1 526 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 BARHL2Q9NY43 387 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 DNMT3BQ9UBC3 853 aaKnown RBP18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 IPPQ9Y573 584 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 FREM2Q5SZK8 3169 aa18.32■□□□□ 0.52
HMGN1P19-201ENST00000436976 NRG2O14511 850 aaPredicted RBP18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 ADAM12O43184 909 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 CHMP2AO43633 222 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 MAFO75444 373 aaPredicted RBP18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 ITGA4P13612 1032 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 HOXA9P31269 272 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 HOXC13P31276 330 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 DNM2P50570 870 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 CCDC6Q16204 474 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 LIN9Q5TKA1 542 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 MCRS1Q96EZ8 462 aa18.31■□□□□ 0.52
HMGN1P19-201ENST00000436976 COLEC11Q9BWP8 271 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms