RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 PCDHA13Q9Y5I0 950 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 ZNF233A6NK53 670 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 TNPO2O14787 897 aaKnown RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 URI1O94763 535 aaPredicted RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 HARSP12081 509 aaKnown RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 VAV2P52735 878 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 MCCD1P59942 119 aaPredicted RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 DRAP1Q14919 205 aaPredicted RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 OLFML2BQ68BL8 750 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 CRELD2Q6UXH1 353 aaPredicted RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 SLC35F6Q8N357 371 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 ELMO3Q96BJ8 720 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 JPH2Q9BR39 696 aaPredicted RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 GPR88Q9GZN0 384 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 ADAMTS1Q9UHI8 967 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 F8VZ95 297 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 N4BP1O75113 896 aaKnown RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 GFPT2O94808 682 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 ZNF865P0CJ78 1059 aaPredicted RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 SCP2P22307 547 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 EFNA5P52803 228 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 CHMP4BP1P59074 171 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 ARHGAP44Q17R89 818 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 ZNF484Q5JVG2 852 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 LMBRD2Q68DH5 695 aaPredicted RBP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 ARHGEF19Q8IW93 802 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 SEMA4DQ92854 862 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.9■■□□□ 1.26
PTPRF-207ENST00000436724 MSTO1Q9BUK6 570 aa22.9■■□□□ 1.26
PTPRF-207ENST00000436724 A0A087X0T9 212 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 A0A0B4J269 797 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 TMEM88BA6NKF7 163 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 P4HA2O15460 535 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 FAM228BP0C875 321 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 CETN1Q12798 172 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 DGKDQ16760 1214 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 FBXO38Q6PIJ6 1188 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 ZNF571Q7Z3V5 609 aaPredicted RBP22.89■■□□□ 1.26
PTPRF-207ENST00000436724 SMC1BQ8NDV3 1235 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 TMC2Q8TDI7 906 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 STK33Q9BYT3 514 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 MYO6Q9UM54 1294 aa22.89■■□□□ 1.26
PTPRF-207ENST00000436724 GNEQ9Y223 722 aaKnown RBP22.89■■□□□ 1.26
PTPRF-207ENST00000436724 PRKCBP05771 671 aa22.89■■□□□ 1.25
PTPRF-207ENST00000436724 HOXD8P13378 290 aaPredicted RBP22.89■■□□□ 1.25
PTPRF-207ENST00000436724 TM4SF4P48230 202 aa22.89■■□□□ 1.25
PTPRF-207ENST00000436724 ERCC6LQ2NKX8 1250 aa22.89■■□□□ 1.25
PTPRF-207ENST00000436724 KRT39Q6A163 491 aa22.89■■□□□ 1.25
PTPRF-207ENST00000436724 ZBTB8OSQ8IWT0 167 aa22.89■■□□□ 1.25
PTPRF-207ENST00000436724 MINDY3Q9H8M7 445 aa22.89■■□□□ 1.25
PTPRF-207ENST00000436724 CSDE1O75534 798 aaKnown RBP22.88■■□□□ 1.25
PTPRF-207ENST00000436724 MAPK6Q16659 721 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 SLFN12LQ6IEE8 588 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 SV2AQ7L0J3 742 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 ZBTB33Q86T24 672 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 TAS1R2Q8TE23 839 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 ARHGAP39Q9C0H5 1083 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 TMEM8AQ9HCN3 771 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 PDE11AQ9HCR9 933 aa22.88■■□□□ 1.25
PTPRF-207ENST00000436724 UBE2TQ9NPD8 197 aaPredicted RBP22.88■■□□□ 1.25
PTPRF-207ENST00000436724 BRCA2P51587 3418 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 MACROD2A1Z1Q3 448 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 INO80B-WBP1J3KQ70 363 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 CLDN3O15551 220 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 KRT86O43790 486 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 EVI5O60447 810 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 ZSCAN20P17040 1043 aaPredicted RBP22.87■■□□□ 1.25
PTPRF-207ENST00000436724 RGS2P41220 211 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 ZNF516Q92618 1163 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 KAT5Q92993 513 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 TCHPQ9BT92 498 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 MRPL4Q9BYD3 311 aaKnown RBP22.87■■□□□ 1.25
PTPRF-207ENST00000436724 INO80BQ9C086 356 aaPredicted RBP22.87■■□□□ 1.25
PTPRF-207ENST00000436724 ZSWIM8A7E2V4 1837 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 PTPRJQ12913 1337 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 B4GALT5O43286 388 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 VTNP04004 478 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 IQCF3P0C7M6 154 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 SOX5P35711 763 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 STAT1P42224 750 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 MAGEA1P43355 309 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 KIF5AQ12840 1032 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 SLC18A3Q16572 532 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 ZNF662Q6ZS27 426 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 CDR2LQ86X02 465 aaPredicted RBP22.87■■□□□ 1.25
PTPRF-207ENST00000436724 KIAA1586Q9HCI6 787 aa22.87■■□□□ 1.25
PTPRF-207ENST00000436724 RBAK-RBAKDNI3L0D1 243 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 CA12O43570 354 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 PPFIA1Q13136 1202 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 MARCH8Q5T0T0 291 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 MTHFD1LQ6UB35 978 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 ZPBP2Q6X784 338 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 TLK2Q86UE8 772 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 LINC01465Q8N7H1 131 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 APBA2Q99767 749 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 ACO2Q99798 780 aaKnown RBP22.86■■□□□ 1.25
PTPRF-207ENST00000436724 RBAKQ9NYW8 714 aaPredicted RBP22.86■■□□□ 1.25
PTPRF-207ENST00000436724 HTTP42858 3142 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 A6NJR5 290 aa22.86■■□□□ 1.25
PTPRF-207ENST00000436724 FOXN3O00409 490 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms