RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 KCNC3Q14003 757 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 CTTNQ14247 550 aaKnown RBP8.63□□□□□ -1.03
VPS50-203ENST00000436177 SAFBQ15424 915 aaKnown RBP eCLIP8.63□□□□□ -1.03
VPS50-203ENST00000436177 PTPN14Q15678 1187 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 NPY5RQ15761 445 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 NOTUMQ6P988 496 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 TMC5Q6UXY8 1006 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 OTOP3Q7RTS5 596 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 TMEM173Q86WV6 379 aaPredicted RBP8.63□□□□□ -1.03
VPS50-203ENST00000436177 C12orf76Q8N812 135 aaPredicted RBP8.63□□□□□ -1.03
VPS50-203ENST00000436177 DYDC2Q96IM9 177 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 TMEM175Q9BSA9 504 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 APOL6Q9BWW8 343 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 NRDE2Q9H7Z3 1164 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 IFT122Q9HBG6 1241 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 RGL1Q9NZL6 768 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 DNAJB4Q9UDY4 337 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 SSX2IPQ9Y2D8 614 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 PRG3Q9Y2Y8 225 aaPredicted RBP8.63□□□□□ -1.03
VPS50-203ENST00000436177 IRAK3Q9Y616 596 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 ATG2AQ2TAZ0 1938 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 PLXNA4Q9HCM2 1894 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 MEIS3P2A8K0S8 358 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 POMCP01189 267 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 AXLP30530 894 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 MLH1P40692 756 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 OR1G1P47890 313 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 COPS2P61201 443 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 FERMT3Q86UX7 667 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 ZNF280BQ86YH2 543 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 PRSS33Q8NF86 280 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
VPS50-203ENST00000436177 STAMQ92783 540 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 RPS6KC1Q96S38 1066 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 EIF2AK1Q9BQI3 630 aaKnown RBP8.62□□□□□ -1.03
VPS50-203ENST00000436177 CDH22Q9UJ99 828 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 FBXL21Q9UKT6 434 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 TPCN1Q9ULQ1 816 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 PCDHA12Q9UN75 941 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 LOXHD1Q8IVV2 1947 aa8.62□□□□□ -1.03
VPS50-203ENST00000436177 FNDC1Q4ZHG4 1894 aaPredicted RBP8.62□□□□□ -1.03
VPS50-203ENST00000436177 ARL5CA6NH57 179 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 LRRIQ4A6NIV6 560 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 TSPAN1O60635 241 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 USO1O60763 962 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 DGAT1O75907 488 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 GLUD1P00367 558 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 ASGR2P07307 311 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 NCLP19338 710 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 AVPR2P30518 371 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 TXKP42681 527 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 GLUD2P49448 558 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 VCPP55072 806 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 PTENP60484 403 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 CREMQ03060 361 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 NR5A1Q13285 461 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 GNL2Q13823 731 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 MRPL10Q7Z7H8 261 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 ZBTB8OSQ8IWT0 167 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 DIS3L2Q8IYB7 885 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 ZDHHC14Q8IZN3 488 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 HAS1Q92839 578 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 ATOH1Q92858 354 aaPredicted RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 GTF3C6Q969F1 213 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 ASIC4Q96FT7 647 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 GAD1Q99259 594 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 HERC2P3Q9BVR0 1158 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 COLEC11Q9BWP8 271 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 CSRNP2Q9H175 543 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 POLR3FQ9H1D9 316 aaPredicted RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 TTC12Q9H892 705 aaPredicted RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 MINDY3Q9H8M7 445 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 GJB4Q9NTQ9 266 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 ANKEF1Q9NU02 776 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 WRAP73Q9P2S5 460 aaPredicted RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 IPPQ9Y573 584 aa8.61□□□□□ -1.03
VPS50-203ENST00000436177 PTPRZ1P23471 2315 aaPredicted RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 RIF1Q5UIP0 2472 aaKnown RBP8.61□□□□□ -1.03
VPS50-203ENST00000436177 NRP1O14786 923 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 DDHD2O94830 711 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 LYPLA2O95372 231 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 BRD1O95696 1058 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 SOD2P04179 222 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 CNPP09543 421 aaKnown RBP8.6□□□□□ -1.03
VPS50-203ENST00000436177 ATP2B1P20020 1258 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 HOXA11P31270 313 aaPredicted RBP8.6□□□□□ -1.03
VPS50-203ENST00000436177 GBP2P32456 591 aaPredicted RBP8.6□□□□□ -1.03
VPS50-203ENST00000436177 SCNN1GP51170 649 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 CLCN4P51793 760 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 CAPSQ13938 189 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 UBXN11Q5T124 520 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 C15orf39Q6ZRI6 1047 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 GPR149Q86SP6 731 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 NECAB1Q8N987 351 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms