RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TMC3Q7Z5M5 1100 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 VSIG10LQ86VR7 867 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 DDX42Q86XP3 938 aaKnown RBP eCLIP11.22□□□□□ -0.61
CD44-210ENST00000434472 PALB2Q86YC2 1186 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 PPM1KQ8N3J5 372 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 FBXL13Q8NEE6 735 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 DHX38Q92620 1227 aaKnown RBP11.22□□□□□ -0.61
CD44-210ENST00000434472 IFT74Q96LB3 600 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 FBXL18Q96ME1 805 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 PLVAPQ9BX97 442 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 NEUROG2Q9H2A3 272 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 NFS1Q9Y697 457 aa11.22□□□□□ -0.61
CD44-210ENST00000434472 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 ANKRD63C9JTQ0 380 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 ATP9AO75110 1047 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 PPFIA2O75334 1257 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 DGAT1O75907 488 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 NR3C2P08235 984 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 CCT5P48643 541 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 TGFB2P61812 414 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 CDR2Q01850 454 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 MAP2K1Q02750 393 aaPredicted RBP11.21□□□□□ -0.61
CD44-210ENST00000434472 CYP24A1Q07973 514 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 SLC20A2Q08357 652 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 PDCLQ13371 301 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 MTMR2Q13614 643 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 UAP1Q16222 522 aaPredicted RBP11.21□□□□□ -0.61
CD44-210ENST00000434472 PLA2G4FQ68DD2 849 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 NOP9Q86U38 636 aaKnown RBP11.21□□□□□ -0.61
CD44-210ENST00000434472 CBWD2Q8IUF1 395 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 SCYL3Q8IZE3 742 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 GPD1LQ8N335 351 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 SH2D3CQ8N5H7 860 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 C3orf20Q8ND61 904 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 NSUN6Q8TEA1 469 aaKnown RBP11.21□□□□□ -0.61
CD44-210ENST00000434472 MAIP1Q8WWC4 291 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 TRIM11Q96F44 468 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 CEP170P1Q96L14 293 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 KREMEN1Q96MU8 473 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 FMO2Q99518 471 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 EPN3Q9H201 632 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 DPH5Q9H2P9 285 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 GPRC5CQ9NQ84 441 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 RAB20Q9NX57 234 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 PCYOX1Q9UHG3 505 aa11.21□□□□□ -0.61
CD44-210ENST00000434472 ATXN2Q99700 1313 aaKnown RBP11.21□□□□□ -0.61
CD44-210ENST00000434472 A0A087WUV0 522 aaPredicted RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 TMEM110-MUSTN1A8MSY1 372 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 NDUFAB1O14561 156 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 CYP26A1O43174 497 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 COMTP21964 271 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ADSSP30520 456 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 LSP1P33241 339 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PEX5P50542 639 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ATP1A2P50993 1020 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 BACE1P56817 501 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 BPIFB4P59827 614 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 FMO1Q01740 532 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 GCNT1Q02742 428 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 DHX9Q08211 1270 aaKnown RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 ZNF844Q08AG5 666 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 BAATQ14032 418 aaPredicted RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 MESDQ14696 234 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PTGISQ16647 500 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 BRDTQ58F21 947 aaPredicted RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 NAA35Q5VZE5 725 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ACAD10Q6JQN1 1059 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ANO5Q75V66 913 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 HOOK3Q86VS8 718 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ZNF677Q86XU0 584 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 JAMLQ86YT9 394 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ZNF564Q8TBZ8 553 aaPredicted RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 HELQQ8TDG4 1101 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PPM1EQ8WY54 764 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 POMGNT1Q8WZA1 660 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ALG3Q92685 438 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ZNF653Q96CK0 615 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 C12orf42Q96LP6 360 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PCDHB18PQ96TA0 734 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PAGR1Q9BTK6 254 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 CELF4Q9BZC1 486 aaKnown RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 TAOK3Q9H2K8 898 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 GABBR1Q9UBS5 961 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 MTRF1LQ9UGC7 380 aaKnown RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PCDHA3Q9Y5H8 950 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 SPOPO43791 374 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 MYBL1P10243 752 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 CYP11B1P15538 503 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 DSG3P32926 999 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PTGIRP43119 386 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 RWDD2BP57060 319 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 IFFO1Q0D2I5 559 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ZNF211Q13398 564 aaPredicted RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 CYP1B1Q16678 543 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 PPP1R2P3Q6NXS1 205 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 MIS18BP1Q6P0N0 1132 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms