RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 TIFAQ96CG3 184 aa16.12■□□□□ 0.17
TNFAIP3-204ENST00000433680 GSDMAQ96QA5 445 aa16.12■□□□□ 0.17
TNFAIP3-204ENST00000433680 SLC28A3Q9HAS3 691 aa16.12■□□□□ 0.17
TNFAIP3-204ENST00000433680 USP20Q9Y2K6 914 aa16.12■□□□□ 0.17
TNFAIP3-204ENST00000433680 GIT1Q9Y2X7 761 aa16.12■□□□□ 0.17
TNFAIP3-204ENST00000433680 ABLIM1O14639 778 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 KIF20AO95235 890 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 CA3P07451 260 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 FGFR1P11362 822 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 CASP5P51878 434 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 PNOCQ13519 176 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 NOLC1Q14978 699 aaKnown RBP eCLIP16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 AGMOQ6ZNB7 445 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 SYCP3Q8IZU3 236 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 FIBCD1Q8N539 461 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 SPATA20Q8TB22 786 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 HPS3Q969F9 1004 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 SAMD11Q96NU1 681 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 MRPL9Q9BYD2 267 aaKnown RBP16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 CDT1Q9H211 546 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 RSAD1Q9HA92 442 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 KANSL3Q9P2N6 904 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 YBX2Q9Y2T7 364 aaKnown RBP16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 RWDD3Q9Y3V2 267 aa16.11■□□□□ 0.17
TNFAIP3-204ENST00000433680 TBKBP1A7MCY6 615 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 SOX1O00570 391 aaPredicted RBP16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 INPPL1O15357 1258 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 MYOGP15173 224 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 GRM5P41594 1212 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 MATR3P43243 847 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 SNRPFP62306 86 aaKnown RBP16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 BMT2Q1RMZ1 405 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 PPP2R2DQ66LE6 453 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 URGCPQ8TCY9 931 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 HELQQ8TDG4 1101 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 LPPQ93052 612 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 SMARCE1Q969G3 411 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 CASD1Q96PB1 797 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 CCDC94Q9BW85 323 aaPredicted RBP16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 FGFBP2Q9BYJ0 223 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 NKX2-4Q9H2Z4 354 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 NXF3Q9H4D5 531 aaKnown RBP16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 SLC39A2Q9NP94 309 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 RNF19AQ9NV58 838 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 ANKFY1Q9P2R3 1169 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 STYXL1Q9Y6J8 313 aa16.1■□□□□ 0.17
TNFAIP3-204ENST00000433680 A0A0B4J269 797 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 LCHNA4D1U4 455 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 LINC01553A4QN01 128 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 CARNS1A5YM72 827 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 OFD1O75665 1012 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 PRPF6O94906 941 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 STK4Q13043 487 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 NOMO2Q5JPE7 1267 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 ZBTB33Q86T24 672 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 LRRC43Q8N309 656 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 SCFD1Q8WVM8 642 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 LRCH3Q96II8 777 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 ZBTB45Q96K62 511 aaPredicted RBP16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 TOPORSQ9NS56 1045 aaPredicted RBP16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 CGNQ9P2M7 1197 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 HES2Q9Y543 173 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 TRIOBPQ9H2D6 2365 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 RALGAPA2Q2PPJ7 1873 aa16.09■□□□□ 0.17
TNFAIP3-204ENST00000433680 LAMA3Q16787 3333 aa16.08■□□□□ 0.17
TNFAIP3-204ENST00000433680 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 KIAA0391O15091 583 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 OGTO15294 1046 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 GARTP22102 1010 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 KCNA4P22459 653 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 FXR1P51114 621 aaKnown RBP eCLIP16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 YARSP54577 528 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 TAP1Q03518 808 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 KCNA1Q09470 495 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 PAN2Q504Q3 1202 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 SLC39A4Q6P5W5 647 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 KIAA0895Q8NCT3 520 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 GLIS3Q8NEA6 775 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 CLP1Q92989 425 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 TGS1Q96RS0 853 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 APOL6Q9BWW8 343 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 GBP3Q9H0R5 595 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 AAASQ9NRG9 546 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 SNTG2Q9NY99 539 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 PARP2Q9UGN5 583 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.16
TNFAIP3-204ENST00000433680 ARL5CA6NH57 179 aa16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 MEIS3P2A8K0S8 358 aa16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 MBD3O95983 291 aa16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 LDHAP00338 332 aaKnown RBP16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 CLTAP09496 248 aa16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 HARSP12081 509 aaKnown RBP16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 AKAP5P24588 427 aa16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 GATMP50440 423 aa16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 ERVK-21P61565 698 aa16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 POU5F1Q01860 360 aaKnown RBP16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-204ENST00000433680 KNOP1Q1ED39 458 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms