RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 PCDHA5Q9Y5H7 936 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 STYXL1Q9Y6J8 313 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 MICAL3Q7RTP6 2002 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 MEIS3P2A8K0S8 358 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 ANKRD63C9JTQ0 380 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 DNAJB2P25686 324 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 HOXD13P35453 343 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 BMT2Q1RMZ1 405 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 CLLU1OSQ5K130 101 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 SLFN12LQ6IEE8 588 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 SLC39A4Q6P5W5 647 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 GLB1LQ6UWU2 654 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 ZBTB33Q86T24 672 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 CMTR2Q8IYT2 770 aaKnown RBP20.17■□□□□ 0.82
RFTN1-202ENST00000431547 SYCP3Q8IZU3 236 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 SCFD1Q8WVM8 642 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 SMARCE1Q969G3 411 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 CASD1Q96PB1 797 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 RMND1Q9NWS8 449 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 GIT1Q9Y2X7 761 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 UBE4BO95155 1302 aa20.17■□□□□ 0.82
RFTN1-202ENST00000431547 TTC3P53804 2025 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 A0A0B4J269 797 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 LCHNA4D1U4 455 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 OFD1O75665 1012 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 CA3P07451 260 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 GRM5P41594 1212 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 GATMP50440 423 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 NOLC1Q14978 699 aaKnown RBP eCLIP20.16■□□□□ 0.82
RFTN1-202ENST00000431547 ABI1Q8IZP0 508 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 KIAA0895Q8NCT3 520 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 TIFAQ96CG3 184 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 HAPLN2Q9GZV7 340 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 NKX2-4Q9H2Z4 354 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 RSAD1Q9HA92 442 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 ANKFY1Q9P2R3 1169 aa20.16■□□□□ 0.82
RFTN1-202ENST00000431547 TBKBP1A7MCY6 615 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 INPPL1O15357 1258 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 MCM4P33991 863 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 BTG3Q14201 252 aaPredicted RBP20.15■□□□□ 0.82
RFTN1-202ENST00000431547 FIBCD1Q8N539 461 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 HELQQ8TDG4 1101 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 ERCC4Q92889 916 aaPredicted RBP20.15■□□□□ 0.82
RFTN1-202ENST00000431547 GTPBP4Q9BZE4 634 aaKnown RBP20.15■□□□□ 0.82
RFTN1-202ENST00000431547 IKZF4Q9H2S9 585 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 SLC28A3Q9HAS3 691 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 SNTG2Q9NY99 539 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 ZMYM2Q9UBW7 1377 aa20.15■□□□□ 0.82
RFTN1-202ENST00000431547 TISP43B9A030 160 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 AKAP5P24588 427 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 ADSSP30520 456 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 MATR3P43243 847 aaKnown RBP eCLIP20.14■□□□□ 0.81
RFTN1-202ENST00000431547 SNRPFP62306 86 aaKnown RBP20.14■□□□□ 0.81
RFTN1-202ENST00000431547 CAMK4Q16566 473 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 KYAT1Q16773 422 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 NOMO2Q5JPE7 1267 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 GPR153Q6NV75 609 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 GPT2Q8TD30 523 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 LRCH3Q96II8 777 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 CCDC94Q9BW85 323 aaPredicted RBP20.14■□□□□ 0.81
RFTN1-202ENST00000431547 APOL6Q9BWW8 343 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 GBP3Q9H0R5 595 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 CLSTN2Q9H4D0 955 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 PARP2Q9UGN5 583 aa20.14■□□□□ 0.81
RFTN1-202ENST00000431547 COL4A6Q14031 1691 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 TMEM265A0A087WTH1 108 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 LINC01553A4QN01 128 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 ARL5CA6NH57 179 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 OGTO15294 1046 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 TGFB1I1O43294 461 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 KIF20AO95235 890 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 GARTP22102 1010 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 TAP1Q03518 808 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 KNOP1Q1ED39 458 aaKnown RBP20.13■□□□□ 0.81
RFTN1-202ENST00000431547 PAN2Q504Q3 1202 aaKnown RBP20.13■□□□□ 0.81
RFTN1-202ENST00000431547 THNSL1Q8IYQ7 743 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 CEP120Q8N960 986 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 ACAP3Q96P50 834 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 GAD1Q99259 594 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 MSTO1Q9BUK6 570 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 MRPL9Q9BYD2 267 aaKnown RBP20.13■□□□□ 0.81
RFTN1-202ENST00000431547 KANSL3Q9P2N6 904 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 GDAQ9Y2T3 454 aa20.13■□□□□ 0.81
RFTN1-202ENST00000431547 PTPRSQ13332 1948 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 FAM189A1O60320 539 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 RECQL4O94761 1208 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 ARHGEF15O94989 841 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 MBD3O95983 291 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 CLTAP09496 248 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 HARSP12081 509 aaKnown RBP20.12■□□□□ 0.81
RFTN1-202ENST00000431547 ZNF658Q5TYW1 1059 aaPredicted RBP20.12■□□□□ 0.81
RFTN1-202ENST00000431547 PPP2R2DQ66LE6 453 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 LRRC55Q6ZSA7 311 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 NELFCDQ8IXH7 590 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 LRRC43Q8N309 656 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 GUF1Q8N442 669 aaKnown RBP20.12■□□□□ 0.81
RFTN1-202ENST00000431547 URGCPQ8TCY9 931 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 POMGNT1Q8WZA1 660 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 CLP1Q92989 425 aaKnown RBP20.12■□□□□ 0.81
RFTN1-202ENST00000431547 TYW1Q9NV66 732 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms