RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SLC9A2Q9UBY0 812 aa11.28□□□□□ -0.6
ATG4B-212ENST00000430617 RAB23Q9ULC3 237 aa11.28□□□□□ -0.6
ATG4B-212ENST00000430617 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
ATG4B-212ENST00000430617 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
ATG4B-212ENST00000430617 UBIAD1Q9Y5Z9 338 aa11.28□□□□□ -0.6
ATG4B-212ENST00000430617 ATG2BQ96BY7 2078 aa11.28□□□□□ -0.6
ATG4B-212ENST00000430617 SHISA7A6NL88 538 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 BTBD18B2RXH4 712 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 C2CD2LO14523 706 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 ZSCAN20P17040 1043 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-212ENST00000430617 FGFR4P22455 802 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 KRT2P35908 639 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 SLC11A1P49279 550 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 ACTR2P61160 394 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 PRKCQQ04759 706 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
ATG4B-212ENST00000430617 IL31Q6EBC2 164 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 FAM173BQ6P4H8 233 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 NOSTRINQ8IVI9 506 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 CELF5Q8N6W0 485 aaKnown RBP11.27□□□□□ -0.61
ATG4B-212ENST00000430617 LPPQ93052 612 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 ZNF668Q96K58 619 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-212ENST00000430617 FAM126AQ9BYI3 521 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-212ENST00000430617 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 TBC1D13Q9NVG8 400 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 FREM2Q5SZK8 3169 aa11.27□□□□□ -0.61
ATG4B-212ENST00000430617 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 TEX28O15482 410 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 PAPLNO95428 1278 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 C22orf31O95567 290 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 SPINK2P20155 84 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 MCM4P33991 863 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 MAGEA9P43362 315 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 RPS9P46781 194 aaKnown RBP11.26□□□□□ -0.61
ATG4B-212ENST00000430617 NAPAP54920 295 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 SRSF5Q13243 272 aaKnown RBP11.26□□□□□ -0.61
ATG4B-212ENST00000430617 NR5A1Q13285 461 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 SAFBQ15424 915 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATG4B-212ENST00000430617 NFKBIBQ15653 356 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 GALNT17Q6IS24 598 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 ZNF280BQ86YH2 543 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-212ENST00000430617 NT5C3AQ9H0P0 336 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 ADAMTS10Q9H324 1103 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 JADE2Q9NQC1 790 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 PCDHA4Q9UN74 947 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 COL1A2P08123 1366 aa11.26□□□□□ -0.61
ATG4B-212ENST00000430617 VWA8A3KMH1 1905 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 IGKV6D-21A0A0A0MT36 114 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 TAF4O00268 1085 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 HRO43593 1189 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 HBP1O60381 514 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 KCNK5O95279 499 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 ATG7O95352 703 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 ATP4AP20648 1035 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 LIMK1P53667 647 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
ATG4B-212ENST00000430617 NLRP5P59047 1200 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 TRAF1Q13077 416 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 SF3A2Q15428 464 aaKnown RBP11.25□□□□□ -0.61
ATG4B-212ENST00000430617 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-212ENST00000430617 EARS2Q5JPH6 523 aaKnown RBP11.25□□□□□ -0.61
ATG4B-212ENST00000430617 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-212ENST00000430617 TPRG1Q6ZUI0 275 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 TAS1R1Q7RTX1 841 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 BLIDQ8IZY5 108 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 METTL13Q8N6R0 699 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 PIDD1Q9HB75 910 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 MRPL17Q9NRX2 175 aaKnown RBP11.25□□□□□ -0.61
ATG4B-212ENST00000430617 KCNH7Q9NS40 1196 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 WASF3Q9UPY6 502 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 CELSR3Q9NYQ7 3312 aa11.25□□□□□ -0.61
ATG4B-212ENST00000430617 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 DDHD2O94830 711 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 TOP3BO95985 862 aaKnown RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 CCNE2O96020 404 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 GLUD1P00367 558 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 CLCN3P51790 818 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 ADCY7P51828 1080 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 KRT85P78386 507 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 SIM2Q14190 667 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 CCDC6Q16204 474 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 ATL3Q6DD88 541 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 RSPO2Q6UXX9 243 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 CCDC60Q8IWA6 550 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-212ENST00000430617 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
ATG4B-212ENST00000430617 KXD1Q9BQD3 176 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms