RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 GAD1Q99259 594 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 EIF2AQ9BY44 585 aaKnown RBP10.07□□□□□ -0.8
HDAC9-211ENST00000430454 FZD8Q9H461 694 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 CD320Q9NPF0 282 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC9-211ENST00000430454 RBM19Q9Y4C8 960 aaKnown RBP10.07□□□□□ -0.8
HDAC9-211ENST00000430454 HCFC2Q9Y5Z7 792 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 PLXNA4Q9HCM2 1894 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 MYO7AQ13402 2215 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 H0YCG3 227 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 K7ERI5 159 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 TADA2AO75478 443 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 DDHD2O94830 711 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 SOD2P04179 222 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 LIG1P18858 919 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 GLUD2P49448 558 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 SMTNP53814 917 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 YARSP54577 528 aaKnown RBP10.06□□□□□ -0.8
HDAC9-211ENST00000430454 ELAVL2Q12926 359 aaKnown RBP10.06□□□□□ -0.8
HDAC9-211ENST00000430454 KCNC3Q14003 757 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 PTPN14Q15678 1187 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 AMHR2Q16671 573 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 USP41Q3LFD5 358 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 LARP1BQ659C4 914 aaKnown RBP10.06□□□□□ -0.8
HDAC9-211ENST00000430454 CYP26C1Q6V0L0 522 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 COLGALT2Q8IYK4 626 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 C4orf32Q8N8J7 132 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 SUSD6Q92537 303 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 FAM122AQ96E09 287 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 RPGRIP1Q96KN7 1286 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 AK8Q96MA6 479 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 TBC1D32Q96NH3 1257 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 HERC2P3Q9BVR0 1158 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 KCNH6Q9H252 994 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 SFXN1Q9H9B4 322 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 TOPORSQ9NS56 1045 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-211ENST00000430454 KCND2Q9NZV8 630 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 DNAJB4Q9UDY4 337 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 PRG3Q9Y2Y8 225 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-211ENST00000430454 PCDHB6Q9Y5E3 794 aa10.06□□□□□ -0.8
HDAC9-211ENST00000430454 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 A0A087WWV3 80 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 MEIS3P2A8K0S8 358 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 B4GALT5O43286 388 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 AKAP5P24588 427 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 ABCD1P33897 745 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 UBA7P41226 1012 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 TOB1P50616 345 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 SCNN1GP51170 649 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 DSC1Q08554 894 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 STRN3Q13033 797 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 ZRSR1Q15695 479 aaKnown RBP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 SYCE2Q6PIF2 218 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 BRAPQ7Z569 592 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 VN1R2Q8NFZ6 395 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 HDAC7Q8WUI4 952 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 EDAQ92838 391 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 ACSF2Q96CM8 615 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 CALML4Q96GE6 196 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 FBXL18Q96ME1 805 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 NXF3Q9H4D5 531 aaKnown RBP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 MUTYHQ9UIF7 546 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 HES2Q9Y543 173 aa10.05□□□□□ -0.8
HDAC9-211ENST00000430454 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 SF3B1O75533 1304 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDAC9-211ENST00000430454 TRAPPC3O43617 180 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 GLUD1P00367 558 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDAC9-211ENST00000430454 THP07101 528 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 TUSC3Q13454 348 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-211ENST00000430454 NBR1Q14596 966 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 RARS2Q5T160 578 aaKnown RBP10.04□□□□□ -0.8
HDAC9-211ENST00000430454 ATF7IP2Q5U623 682 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 C15orf39Q6ZRI6 1047 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 OTOP3Q7RTS5 596 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 TMEM173Q86WV6 379 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-211ENST00000430454 UBALD2Q8IYN6 164 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 TDRD5Q8NAT2 981 aaKnown RBP10.04□□□□□ -0.8
HDAC9-211ENST00000430454 SLC22A17Q8WUG5 538 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 AUTS2Q8WXX7 1259 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 STAMQ92783 540 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 UROC1Q96N76 676 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 KLHL5Q96PQ7 755 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 PRRX2Q99811 253 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-211ENST00000430454 APOL5Q9BWW9 433 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 MRPL4Q9BYD3 311 aaKnown RBP10.04□□□□□ -0.8
HDAC9-211ENST00000430454 RNF39Q9H2S5 420 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 PDZD7Q9H5P4 517 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms