RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 RPAINQ86UA6 219 aa13.38□□□□□ -0.27
CDH3-202ENST00000429102 CYP4X1Q8N118 509 aa13.38□□□□□ -0.27
CDH3-202ENST00000429102 RASGEF1CQ8N431 466 aa13.38□□□□□ -0.27
CDH3-202ENST00000429102 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
CDH3-202ENST00000429102 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
CDH3-202ENST00000429102 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
CDH3-202ENST00000429102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH3-202ENST00000429102 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 ALAS1P13196 640 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 MAPK4P31152 587 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 TMEM237Q96Q45 408 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 KLF6Q99612 283 aaPredicted RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 FAM198AQ9UFP1 575 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 ZSCAN5DPP0CG00 497 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 NEFHP12036 1026 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 POU5F1Q01860 360 aaKnown RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 C6orf118Q5T5N4 469 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 RFX8Q6ZV50 586 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 AGAP11Q8TF27 550 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 ADAM7Q9H2U9 754 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 C12orf65Q9H3J6 166 aaKnown RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH3-202ENST00000429102 PFASO15067 1338 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 GOLGA8RI6L899 631 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 SREBF1P36956 1147 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 STAT2P52630 851 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 ITGA8P53708 1063 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 ATP13A4Q4VNC1 1196 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 SPOPLQ6IQ16 392 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 VSIG1Q86XK7 387 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 SLC13A5Q86YT5 568 aaPredicted RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 TMEM117Q9H0C3 514 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 CNOT10Q9H9A5 744 aaKnown RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 R3HDM2Q9Y2K5 976 aaKnown RBP13.37□□□□□ -0.27
CDH3-202ENST00000429102 ZMYM2Q9UBW7 1377 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
CDH3-202ENST00000429102 MYH7BA7E2Y1 1941 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 PASKQ96RG2 1323 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 TESPA1A2RU30 521 aaPredicted RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 ANP32DO95626 131 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 KRT10P13645 584 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 ALDH5A1P51649 535 aaPredicted RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 PRELPP51888 382 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 EIF3BP55884 814 aaKnown RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 DYNLT1P63172 113 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 STXBP4Q6ZWJ1 553 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 SEMA4DQ92854 862 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 PRMT6Q96LA8 375 aaPredicted RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 NACC1Q96RE7 527 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 TGS1Q96RS0 853 aaKnown RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 NAP1L4Q99733 375 aaKnown RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 HSD17B14Q9BPX1 270 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 COA1Q9GZY4 146 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 HSPBP1Q9NZL4 362 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 KRT15P19012 456 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 ZNF365Q70YC5 407 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 TAS1R2Q8TE23 839 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 CCDC17Q96LX7 622 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 BANF1O75531 89 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 RAD17O75943 681 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 ETS1P14921 441 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 MPP2Q14168 576 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 IL31RAQ8NI17 732 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 ATXN2LQ8WWM7 1075 aaKnown RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 POMGNT1Q8WZA1 660 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 C11orf70Q9BRQ4 267 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 LARSQ9P2J5 1176 aaKnown RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 ANAPC5Q9UJX4 755 aa13.36□□□□□ -0.27
CDH3-202ENST00000429102 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
CDH3-202ENST00000429102 CHRNA3P32297 505 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 RWDD2BP57060 319 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 CNGA2Q16280 664 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 AOC3Q16853 763 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 TAOK1Q7L7X3 1001 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
CDH3-202ENST00000429102 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
CDH3-202ENST00000429102 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
CDH3-202ENST00000429102 HERPUD2Q9BSE4 406 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 ETNK1Q9HBU6 452 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 SLCO1B3Q9NPD5 702 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 HOMER3Q9NSC5 361 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 KRT16P08779 473 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 GAP43P17677 238 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 PTGIRP43119 386 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 ADCY2Q08462 1091 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
CDH3-202ENST00000429102 CYFIP1Q7L576 1253 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 HAUS6Q7Z4H7 955 aa13.35□□□□□ -0.27
CDH3-202ENST00000429102 TLCD1Q96CP7 247 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms