RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 FAM187BQ17R55 369 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 CBWD6Q4V339 395 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 CBWD3Q5JTY5 395 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 CBWD5Q5RIA9 395 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 ATF7IP2Q5U623 682 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 LMBRD2Q68DH5 695 aaPredicted RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 SPECC1LQ69YQ0 1117 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 SCARA3Q6AZY7 606 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 ZPBP2Q6X784 338 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 ZNF410Q86VK4 478 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 SESTD1Q86VW0 696 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 GPD1LQ8N335 351 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 PCSK9Q8NBP7 692 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 SCLT1Q96NL6 688 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 ERGIC2Q96RQ1 377 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 POP1Q99575 1024 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 FAM213AQ9BRX8 229 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 MSTO1Q9BUK6 570 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 TTYH3Q9C0H2 523 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 CDT1Q9H211 546 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 PDZD7Q9H5P4 517 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 PRMT7Q9NVM4 692 aaPredicted RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 AJAP1Q9UKB5 411 aaPredicted RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 AGO2Q9UKV8 859 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 FRMD4BQ9Y2L6 1034 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 KIAA0100Q14667 2235 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 A0A1W2PQC6 194 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 EXTL3O43909 919 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 NOL4O94818 638 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 ACTN1P12814 892 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 DARSP14868 501 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 SLC9A1P19634 815 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 CASP14P31944 242 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 FMO5P49326 533 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 SNRPFP62306 86 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 MRPS6P82932 125 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 MGAT3Q09327 533 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 NOLC1Q14978 699 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMC6-204ENST00000428868 SNX17Q15036 470 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 PTGISQ16647 500 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 TRIM71Q2Q1W2 868 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 MPZL3Q6UWV2 235 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 TSHZ1Q6ZSZ6 1077 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 CTU1Q7Z7A3 348 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 SERINC5Q86VE9 423 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 TC2NQ8N9U0 490 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 CPLX3Q8WVH0 158 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 VTI1AQ96AJ9 217 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 MFSD14AQ96MC6 490 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 LSM14BQ9BX40 385 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 TRPV6Q9H1D0 765 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 CXCL16Q9H2A7 254 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 METTL14Q9HCE5 456 aaKnown RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 KCNG1Q9UIX4 513 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 PHF24Q9UPV7 400 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 CDY2AQ9Y6F7 541 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 FNDC1Q4ZHG4 1894 aaPredicted RBP9.67□□□□□ -0.86
SMC6-204ENST00000428868 TSC2P49815 1807 aa9.67□□□□□ -0.86
SMC6-204ENST00000428868 MYH10P35580 1976 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 LTBP2Q14767 1821 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 TTC26A0AVF1 554 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 MAPK13O15264 365 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 B4GALT4O60513 344 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 TOM1L1O75674 476 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 CHRNA1P02708 482 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 TPM3P06753 285 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 GNAT1P11488 350 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 ABCD1P33897 745 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 GCLMP48507 274 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 VAMP7P51809 220 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 MCCD1P59942 119 aaPredicted RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 OSTNP61366 133 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 CCZ1BP86790 482 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 CCZ1P86791 482 aaPredicted RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 MCL1Q07820 350 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 FKBP15Q5T1M5 1219 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 E4F1Q66K89 784 aaPredicted RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 GJB7Q6PEY0 223 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 SRGAP1Q7Z6B7 1085 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 FAM228AQ86W67 206 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 TMEM139Q8IV31 216 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 THNSL1Q8IYQ7 743 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 SLC43A3Q8NBI5 491 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 PARD3BQ8TEW8 1205 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 ZNF516Q92618 1163 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 CCDC127Q96BQ5 260 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 ZNF333Q96JL9 665 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 TSEN34Q9BSV6 310 aaKnown RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 GCOM2Q9BZD3 368 aaPredicted RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 GANQ9H2C0 597 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 PDE11AQ9HCR9 933 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 SIX2Q9NPC8 291 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms