RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 HOOK1Q9UJC3 728 aaKnown RBP24.46■■□□□ 1.51
PTPN18-205ENST00000428843 TBKBP1A7MCY6 615 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 EIF3DO15371 548 aaKnown RBP eCLIP24.45■■□□□ 1.5
PTPN18-205ENST00000428843 HOXA2O43364 376 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 ARHGEF15O94989 841 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 PSMD2Q13200 908 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 PAN2Q504Q3 1202 aaKnown RBP24.45■■□□□ 1.5
PTPN18-205ENST00000428843 SLC39A4Q6P5W5 647 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 HELQQ8TDG4 1101 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 ERCC4Q92889 916 aaPredicted RBP24.45■■□□□ 1.5
PTPN18-205ENST00000428843 CCDC47Q96A33 483 aaKnown RBP24.45■■□□□ 1.5
PTPN18-205ENST00000428843 TCHPQ9BT92 498 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 EXOC7Q9UPT5 735 aa24.45■■□□□ 1.5
PTPN18-205ENST00000428843 ANKRD63C9JTQ0 380 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 RHOBTB3O94955 611 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 MCF2P10911 925 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 KCNB1Q14721 858 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 CMTR2Q8IYT2 770 aaKnown RBP24.44■■□□□ 1.5
PTPN18-205ENST00000428843 HACE1Q8IYU2 909 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 ABI1Q8IZP0 508 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 ZNF507Q8TCN5 953 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 CASD1Q96PB1 797 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 HAPLN2Q9GZV7 340 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 TMEM117Q9H0C3 514 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 RSAD1Q9HA92 442 aa24.44■■□□□ 1.5
PTPN18-205ENST00000428843 CLDN3O15551 220 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 OFD1O75665 1012 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 HARSP12081 509 aaKnown RBP24.43■■□□□ 1.5
PTPN18-205ENST00000428843 AKAP5P24588 427 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 MATR3P43243 847 aaKnown RBP eCLIP24.43■■□□□ 1.51e-6■■■■□ 25.1
PTPN18-205ENST00000428843 MCL1Q07820 350 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 STK4Q13043 487 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 BTG3Q14201 252 aaPredicted RBP24.43■■□□□ 1.5
PTPN18-205ENST00000428843 NOLC1Q14978 699 aaKnown RBP eCLIP24.43■■□□□ 1.5
PTPN18-205ENST00000428843 KIAA0895Q8NCT3 520 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 TMEM206Q9H813 350 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 SNTG2Q9NY99 539 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 PARP2Q9UGN5 583 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 PCDHA5Q9Y5H7 936 aa24.43■■□□□ 1.5
PTPN18-205ENST00000428843 LAMA2P24043 3122 aaKnown RBP24.42■■□□□ 1.5
PTPN18-205ENST00000428843 UBE4BO95155 1302 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 LINC01553A4QN01 128 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 TISP43B9A030 160 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 SMC2O95347 1197 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 HOXD13P35453 343 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 FXR1P51114 621 aaKnown RBP eCLIP24.42■■□□□ 1.5
PTPN18-205ENST00000428843 GLB1LQ6UWU2 654 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 SYCP3Q8IZU3 236 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 FIBCD1Q8N539 461 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 CEP120Q8N960 986 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 SPATA20Q8TB22 786 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 SCFD1Q8WVM8 642 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 SMARCE1Q969G3 411 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 SLC28A3Q9HAS3 691 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 UBN1Q9NPG3 1134 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 GIT1Q9Y2X7 761 aa24.42■■□□□ 1.5
PTPN18-205ENST00000428843 KIAA1671Q9BY89 1806 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 GRM5P41594 1212 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 TAP1Q03518 808 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 PPP2R2DQ66LE6 453 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 NELFCDQ8IXH7 590 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 GSDMAQ96QA5 445 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 INPP5FQ9Y2H2 1132 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 GDAQ9Y2T3 454 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 ZMYM2Q9UBW7 1377 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 NLRC5Q86WI3 1866 aa24.41■■□□□ 1.5
PTPN18-205ENST00000428843 A0A0B4J269 797 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 RECQL4O94761 1208 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 AFF1P51825 1210 aaKnown RBP24.4■■□□□ 1.5
PTPN18-205ENST00000428843 BMT2Q1RMZ1 405 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 NOMO2Q5JPE7 1267 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 SLFN12LQ6IEE8 588 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 SPRED2Q7Z698 418 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 TMEM192Q8IY95 271 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 THNSL1Q8IYQ7 743 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 GAD1Q99259 594 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 CCDC94Q9BW85 323 aaPredicted RBP24.4■■□□□ 1.5
PTPN18-205ENST00000428843 KLK14Q9P0G3 267 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 MRPL42Q9Y6G3 142 aaKnown RBP24.4■■□□□ 1.5
PTPN18-205ENST00000428843 STYXL1Q9Y6J8 313 aa24.4■■□□□ 1.5
PTPN18-205ENST00000428843 ARL5CA6NH57 179 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 MLH1P40692 756 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 OSTNP61366 133 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 CAMK4Q16566 473 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 SEZ6Q53EL9 994 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 LRRC55Q6ZSA7 311 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 GPT2Q8TD30 523 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 RSPH1Q8WYR4 309 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 TYW1Q9NV66 732 aaKnown RBP24.39■■□□□ 1.49
PTPN18-205ENST00000428843 RMND1Q9NWS8 449 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 HCSTQ9UBK5 93 aa24.39■■□□□ 1.49
PTPN18-205ENST00000428843 TRIP11Q15643 1979 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 TDRD15B5MCY1 1934 aaKnown RBP24.38■■□□□ 1.49
PTPN18-205ENST00000428843 TMEM265A0A087WTH1 108 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 LINC00271P0C7V0 271 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 ADSSP30520 456 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 MCM4P33991 863 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 LRRC43Q8N309 656 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 URGCPQ8TCY9 931 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 POMGNT1Q8WZA1 660 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms