RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CCDC137Q6PK04 289 aaKnown RBP17.18■□□□□ 0.34
C9orf3-206ENST00000428313 EPM2AIP1Q7L775 607 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-206ENST00000428313 CCDC25Q86WR0 208 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 DNAAF5Q86Y56 855 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 SLC35G2Q8TBE7 412 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 RSPH1Q8WYR4 309 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 CYLDQ9NQC7 956 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 WHRNQ9P202 907 aa17.18■□□□□ 0.34
C9orf3-206ENST00000428313 CDH16O75309 829 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 TTC4O95801 387 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 ZNF24P17028 368 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 SERPINB3P29508 390 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 GRB10Q13322 594 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-206ENST00000428313 TTC27Q6P3X3 843 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 NLRP9Q7RTR0 991 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 CLNKQ7Z7G1 428 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 RIBC1Q8N443 379 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-206ENST00000428313 ZBTB3Q9H5J0 574 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 AAASQ9NRG9 546 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 MIF4GDA9UHW6 222 aaKnown RBP17.17■□□□□ 0.34
C9orf3-206ENST00000428313 F8W8V4 182 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 HNRNPCP07910 306 aaKnown RBP eCLIP17.17■□□□□ 0.345e-8■■□□□ 13.5
C9orf3-206ENST00000428313 DNAJC3Q13217 504 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 HNRNPDQ14103 355 aaKnown RBP17.17■□□□□ 0.34
C9orf3-206ENST00000428313 PDK4Q16654 411 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 IZUMO2Q6UXV1 221 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 SRRM1Q8IYB3 904 aaKnown RBP17.17■□□□□ 0.34
C9orf3-206ENST00000428313 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
C9orf3-206ENST00000428313 PTCD3Q96EY7 689 aaKnown RBP17.17■□□□□ 0.34
C9orf3-206ENST00000428313 AGBL1Q96MI9 1066 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
C9orf3-206ENST00000428313 COL18A1P39060 1754 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 CD97P48960 835 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 KCNH2Q12809 1159 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 TRIM28Q13263 835 aaKnown RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 ZNF211Q13398 564 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 ORC2Q13416 577 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 GRM2Q14416 872 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 SPARCL1Q14515 664 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 DDB1Q16531 1140 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 P3H1Q32P28 736 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 DYMQ7RTS9 669 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 DTX3LQ8TDB6 740 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 DYDC2Q96IM9 177 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 OSGEPQ9NPF4 335 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 TIMMDC1Q9NPL8 285 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 CNNM1Q9NRU3 951 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 ITGB1BP2Q9UKP3 347 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 BARX2Q9UMQ3 279 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 A6NJR5 290 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 GJA8P48165 433 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 JAM2P57087 298 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 NR1H3Q13133 447 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 BTG3Q14201 252 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 LRRC41Q15345 812 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 MIGA2Q7L4E1 593 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 ALDH16A1Q8IZ83 802 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 CYP4X1Q8N118 509 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 ARHGAP24Q8N264 748 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 RBM46Q8TBY0 533 aaKnown RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 ALG3Q92685 438 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 MCUR1Q96AQ8 359 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 POLR3CQ9BUI4 534 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-206ENST00000428313 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.16■□□□□ 0.341e-7■■■■■ 223.6
C9orf3-206ENST00000428313 TBCCD1Q9NVR7 557 aa17.16■□□□□ 0.34
C9orf3-206ENST00000428313 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 MEGF6O75095 1541 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 ANKRD63C9JTQ0 380 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 PRPF4O43172 522 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■■□ 25.5
C9orf3-206ENST00000428313 COILP38432 576 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 ADARP55265 1226 aaKnown RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 PLOD1Q02809 727 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 CYLC2Q14093 348 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 EXOC3L4Q17RC7 722 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 RHBDF2Q6PJF5 856 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 NCCRP1Q6ZVX7 275 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 C10orf71Q711Q0 1435 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 SLC30A5Q8TAD4 765 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 DENND1AQ8TEH3 1009 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 DIS3LQ8TF46 1054 aaKnown RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 C17orf50Q8WW18 174 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 GFM2Q969S9 779 aaKnown RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 DGCR14Q96DF8 476 aaKnown RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 ZDHHC7Q9NXF8 308 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 BIN2Q9UBW5 565 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-206ENST00000428313 NAALADL1Q9UQQ1 740 aa17.15■□□□□ 0.34
C9orf3-206ENST00000428313 GYG2O15488 501 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 STRNO43815 780 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 ACTN1P12814 892 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 LMNB1P20700 586 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 RAP1GDS1P52306 607 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 GPSM2P81274 684 aa17.14■□□□□ 0.33
C9orf3-206ENST00000428313 PUM3Q15397 648 aaKnown RBP17.14■□□□□ 0.33
C9orf3-206ENST00000428313 CCDC92Q53HC0 331 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms