RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 OVOL3O00110 214 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 HIBADHP31937 336 aaKnown RBP7.26□□□□□ -1.25
C9orf3-205ENST00000427193 EVA1CP58658 441 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 RALBP1Q15311 655 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 CATSPEREQ5SY80 951 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 BRAPQ7Z569 592 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 C2orf69Q8N8R5 385 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 SHCBP1Q8NEM2 672 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 CACTINQ8WUQ7 758 aaKnown RBP7.26□□□□□ -1.25
C9orf3-205ENST00000427193 LPPQ93052 612 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 DNAJC7Q99615 494 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 SMG6Q86US8 1419 aaKnown RBP7.26□□□□□ -1.25
C9orf3-205ENST00000427193 USP19O94966 1318 aa7.26□□□□□ -1.25
C9orf3-205ENST00000427193 C1SP09871 688 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 DGCR2P98153 550 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 PURAQ00577 322 aaKnown RBP7.25□□□□□ -1.25
C9orf3-205ENST00000427193 IRF9Q00978 393 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 ALDH6A1Q02252 535 aaKnown RBP7.25□□□□□ -1.25
C9orf3-205ENST00000427193 TMEM177Q53S58 311 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 CRB2Q5IJ48 1285 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 SOGA3Q5TF21 947 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
C9orf3-205ENST00000427193 NGDNQ8NEJ9 315 aaKnown RBP7.25□□□□□ -1.25
C9orf3-205ENST00000427193 THAP3Q8WTV1 239 aaPredicted RBP7.25□□□□□ -1.25
C9orf3-205ENST00000427193 PLEKHG4BQ96PX9 1271 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 SRPK1Q96SB4 655 aaKnown RBP7.25□□□□□ -1.25
C9orf3-205ENST00000427193 FOXB1Q99853 325 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 POLR3GLQ9BT43 218 aa7.25□□□□□ -1.25
C9orf3-205ENST00000427193 ZNF703Q9H7S9 590 aaPredicted RBP7.25□□□□□ -1.25
C9orf3-205ENST00000427193 CCER2I3L3R5 266 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 CYP27B1O15528 508 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 SESN2P58004 480 aaPredicted RBP7.24□□□□□ -1.25
C9orf3-205ENST00000427193 OTOP1Q7RTM1 612 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 SGMS1Q86VZ5 419 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 NME9Q86XW9 330 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 BCL6BQ8N143 479 aaPredicted RBP7.24□□□□□ -1.25
C9orf3-205ENST00000427193 D2HGDHQ8N465 521 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 IGSF22Q8N9C0 903 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 RABGGTAQ92696 567 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 E2F7Q96AV8 911 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 BOCQ9BWV1 1114 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 GIT1Q9Y2X7 761 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 CTDP1Q9Y5B0 961 aaPredicted RBP7.24□□□□□ -1.25
C9orf3-205ENST00000427193 PIK3C2AO00443 1686 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 COL24A1Q17RW2 1714 aa7.24□□□□□ -1.25
C9orf3-205ENST00000427193 CPDO75976 1380 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 SLIT3O75094 1523 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 ZBTB48P10074 688 aaPredicted RBP7.23□□□□□ -1.25
C9orf3-205ENST00000427193 PPP2R1AP30153 589 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 FNTBP49356 437 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 RIN1Q13671 783 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 ARHGAP44Q17R89 818 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 ABHD17CQ6PCB6 329 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 KLHDC10Q6PID8 442 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 FGD2Q7Z6J4 655 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 RTN4RL1Q86UN2 441 aaPredicted RBP7.23□□□□□ -1.25
C9orf3-205ENST00000427193 FOXRED1Q96CU9 486 aaPredicted RBP7.23□□□□□ -1.25
C9orf3-205ENST00000427193 AGO3Q9H9G7 860 aaKnown RBP7.23□□□□□ -1.25
C9orf3-205ENST00000427193 TRIM39Q9HCM9 518 aa7.23□□□□□ -1.25
C9orf3-205ENST00000427193 WDR33Q9C0J8 1336 aaKnown RBP7.23□□□□□ -1.25
C9orf3-205ENST00000427193 NFAT5O94916 1531 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 CAPN14A8MX76 684 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 H2AFYO75367 372 aaKnown RBP7.22□□□□□ -1.25
C9orf3-205ENST00000427193 TOMM70O94826 608 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 ADAM15Q13444 863 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 TUBA3CQ13748 450 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 DDB1Q16531 1140 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 CCDC184Q52MB2 194 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 C2orf27AQ580R0 203 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 CC2D1BQ5T0F9 858 aaKnown RBP7.22□□□□□ -1.25
C9orf3-205ENST00000427193 TUBA3EQ6PEY2 450 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 ERCC4Q92889 916 aaPredicted RBP7.22□□□□□ -1.25
C9orf3-205ENST00000427193 GFM2Q969S9 779 aaKnown RBP7.22□□□□□ -1.25
C9orf3-205ENST00000427193 NCOA5Q9HCD5 579 aaKnown RBP7.22□□□□□ -1.25
C9orf3-205ENST00000427193 POLKQ9UBT6 870 aa7.22□□□□□ -1.25
C9orf3-205ENST00000427193 COL3A1P02461 1466 aaPredicted RBP7.22□□□□□ -1.25
C9orf3-205ENST00000427193 MYBBP1AQ9BQG0 1328 aaKnown RBP7.22□□□□□ -1.25
C9orf3-205ENST00000427193 KIF24Q5T7B8 1368 aa7.21□□□□□ -1.25
C9orf3-205ENST00000427193 PHRF1Q9P1Y6 1649 aaKnown RBP7.21□□□□□ -1.26
C9orf3-205ENST00000427193 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
C9orf3-205ENST00000427193 ANP32CO43423 234 aa7.21□□□□□ -1.26
C9orf3-205ENST00000427193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.21□□□□□ -1.26
C9orf3-205ENST00000427193 TMEM176AQ96HP8 235 aa7.21□□□□□ -1.26
C9orf3-205ENST00000427193 TRIM8Q9BZR9 551 aa7.21□□□□□ -1.26
C9orf3-205ENST00000427193 SAE1Q9UBE0 346 aaPredicted RBP7.21□□□□□ -1.26
C9orf3-205ENST00000427193 PTCH2Q9Y6C5 1203 aa7.21□□□□□ -1.26
C9orf3-205ENST00000427193 QSER1Q2KHR3 1735 aa7.21□□□□□ -1.26
C9orf3-205ENST00000427193 ANKRD26Q9UPS8 1709 aa7.21□□□□□ -1.26
C9orf3-205ENST00000427193 PAPPAQ13219 1627 aa7.2□□□□□ -1.26
C9orf3-205ENST00000427193 CRB1P82279 1406 aa7.2□□□□□ -1.26
C9orf3-205ENST00000427193 LMO7Q8WWI1 1683 aa7.2□□□□□ -1.26
C9orf3-205ENST00000427193 COL5A2P05997 1499 aaPredicted RBP7.2□□□□□ -1.26
C9orf3-205ENST00000427193 A0A1W2PRX2 142 aa7.2□□□□□ -1.26
C9orf3-205ENST00000427193 B4E1Z4 1266 aa7.2□□□□□ -1.26
C9orf3-205ENST00000427193 MECP2P51608 486 aaKnown RBP7.2□□□□□ -1.26
C9orf3-205ENST00000427193 ROM1Q03395 351 aa7.2□□□□□ -1.26
C9orf3-205ENST00000427193 DPTQ07507 201 aa7.2□□□□□ -1.26
C9orf3-205ENST00000427193 DDX53Q86TM3 631 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms