RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 KIAA0895Q8NCT3 520 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 SPATA20Q8TB22 786 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 ZNF507Q8TCN5 953 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 SP7Q8TDD2 431 aaPredicted RBP26.81■■□□□ 1.88
VEGFA-209ENST00000425836 SCFD1Q8WVM8 642 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 HAPLN2Q9GZV7 340 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 ANKFY1Q9P2R3 1169 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 EXOC7Q9UPT5 735 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 TRIOBPQ9H2D6 2365 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 LAMA2P24043 3122 aaKnown RBP26.81■■□□□ 1.88
VEGFA-209ENST00000425836 PTPRSQ13332 1948 aa26.81■■□□□ 1.88
VEGFA-209ENST00000425836 CLDN3O15551 220 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 MCF2P10911 925 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 ITGA4P13612 1032 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 HOXD13P35453 343 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 MCL1Q07820 350 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 LRCH3Q96II8 777 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 CASD1Q96PB1 797 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 APOL6Q9BWW8 343 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 NKX2-4Q9H2Z4 354 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 TMEM206Q9H813 350 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 TISP43B9A030 160 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 SMC2O95347 1197 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 CA3P07451 260 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 GPT2Q8TD30 523 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 HELQQ8TDG4 1101 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 SMARCE1Q969G3 411 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 GSDMAQ96QA5 445 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 TMEM117Q9H0C3 514 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 SNTG2Q9NY99 539 aa26.8■■□□□ 1.88
VEGFA-209ENST00000425836 TBKBP1A7MCY6 615 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 OFD1O75665 1012 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 ARHGEF15O94989 841 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 AKAP5P24588 427 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 MCM4P33991 863 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 NOLC1Q14978 699 aaKnown RBP eCLIP26.79■■□□□ 1.88
VEGFA-209ENST00000425836 PAN2Q504Q3 1202 aaKnown RBP26.79■■□□□ 1.88
VEGFA-209ENST00000425836 HACE1Q8IYU2 909 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 SYCP3Q8IZU3 236 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 CEP120Q8N960 986 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 TIFAQ96CG3 184 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 RSAD1Q9HA92 442 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 UBN1Q9NPG3 1134 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 STYXL1Q9Y6J8 313 aa26.79■■□□□ 1.88
VEGFA-209ENST00000425836 HARSP12081 509 aaKnown RBP26.78■■□□□ 1.88
VEGFA-209ENST00000425836 MATR3P43243 847 aaKnown RBP eCLIP26.78■■□□□ 1.88
VEGFA-209ENST00000425836 BTG3Q14201 252 aaPredicted RBP26.78■■□□□ 1.88
VEGFA-209ENST00000425836 CAMK4Q16566 473 aa26.78■■□□□ 1.88
VEGFA-209ENST00000425836 BMT2Q1RMZ1 405 aa26.78■■□□□ 1.88
VEGFA-209ENST00000425836 GLB1LQ6UWU2 654 aa26.78■■□□□ 1.88
VEGFA-209ENST00000425836 CMTR2Q8IYT2 770 aaKnown RBP26.78■■□□□ 1.88
VEGFA-209ENST00000425836 ABI1Q8IZP0 508 aa26.78■■□□□ 1.88
VEGFA-209ENST00000425836 RMND1Q9NWS8 449 aa26.78■■□□□ 1.88
VEGFA-209ENST00000425836 UBE4BO95155 1302 aa26.77■■□□□ 1.88
VEGFA-209ENST00000425836 A0A0B4J269 797 aa26.77■■□□□ 1.88
VEGFA-209ENST00000425836 ADSSP30520 456 aa26.77■■□□□ 1.88
VEGFA-209ENST00000425836 NELFCDQ8IXH7 590 aa26.77■■□□□ 1.88
VEGFA-209ENST00000425836 PARP2Q9UGN5 583 aa26.77■■□□□ 1.88
VEGFA-209ENST00000425836 GDAQ9Y2T3 454 aa26.77■■□□□ 1.88
VEGFA-209ENST00000425836 GIT1Q9Y2X7 761 aa26.77■■□□□ 1.88
VEGFA-209ENST00000425836 LINC01553A4QN01 128 aa26.76■■□□□ 1.87
VEGFA-209ENST00000425836 GRM5P41594 1212 aa26.76■■□□□ 1.87
VEGFA-209ENST00000425836 AFF1P51825 1210 aaKnown RBP26.76■■□□□ 1.87
VEGFA-209ENST00000425836 SLFN12LQ6IEE8 588 aa26.76■■□□□ 1.87
VEGFA-209ENST00000425836 THNSL1Q8IYQ7 743 aa26.76■■□□□ 1.87
VEGFA-209ENST00000425836 CLSTN2Q9H4D0 955 aa26.76■■□□□ 1.87
VEGFA-209ENST00000425836 COL4A6Q14031 1691 aa26.76■■□□□ 1.87
VEGFA-209ENST00000425836 ZMYM2Q9UBW7 1377 aa26.76■■□□□ 1.87
VEGFA-209ENST00000425836 OSTNP61366 133 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 TMEM192Q8IY95 271 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 FIBCD1Q8N539 461 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 GAD1Q99259 594 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 MSTO1Q9BUK6 570 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 SLC28A3Q9HAS3 691 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 KLK14Q9P0G3 267 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 INPP5FQ9Y2H2 1132 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 ARL5CA6NH57 179 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 RECQL4O94761 1208 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 MLH1P40692 756 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 TAP1Q03518 808 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 SEZ6Q53EL9 994 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 NOMO2Q5JPE7 1267 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 LRRC55Q6ZSA7 311 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 GBP3Q9H0R5 595 aa26.75■■□□□ 1.87
VEGFA-209ENST00000425836 MRPL42Q9Y6G3 142 aaKnown RBP26.75■■□□□ 1.87
VEGFA-209ENST00000425836 INPPL1O15357 1258 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 TGFB1I1O43294 461 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 FAM189A1O60320 539 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 KNOP1Q1ED39 458 aaKnown RBP26.74■■□□□ 1.87
VEGFA-209ENST00000425836 PPP2R2DQ66LE6 453 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 RSPH1Q8WYR4 309 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 POMGNT1Q8WZA1 660 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 ZFP42Q96MM3 310 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 CCDC94Q9BW85 323 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-209ENST00000425836 TYW1Q9NV66 732 aaKnown RBP26.74■■□□□ 1.87
VEGFA-209ENST00000425836 HCSTQ9UBK5 93 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 MAN1B1Q9UKM7 699 aa26.74■■□□□ 1.87
VEGFA-209ENST00000425836 OGTO15294 1046 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 LINC00271P0C7V0 271 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 FXR1P51114 621 aaKnown RBP eCLIP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms