RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DKC1O60832 514 aaKnown RBP eCLIP18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 IFNAR1P17181 557 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 FSHRP23945 695 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 MLH1P40692 756 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 RFC5P40937 340 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 ATXN1P54253 815 aaKnown RBP18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 NLRP5P59047 1200 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 CREMQ03060 361 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 SNW1Q13573 536 aaKnown RBP18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 FUT10Q6P4F1 479 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 RSPO2Q6UXX9 243 aaPredicted RBP18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 GSTCDQ8NEC7 633 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 ST13P5Q8NFI4 369 aaPredicted RBP18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 BRF1Q92994 677 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 CCDC51Q96ER9 411 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 CEP170P1Q96L14 293 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 EIF2AQ9BY44 585 aaKnown RBP18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 CDH7Q9ULB5 785 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 GIT1Q9Y2X7 761 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 M0R2N6 131 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 MAGEA9P43362 315 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 SCNN1GP51170 649 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 PPP2R5CQ13362 524 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 SLC44A4Q53GD3 710 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 FERMT3Q86UX7 667 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 RNF149Q8NC42 400 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 ZBTB44Q8NCP5 570 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 TCP11Q8WWU5 503 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 NELL1Q92832 810 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 ZFP42Q96MM3 310 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 SLC26A6Q9BXS9 759 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 SPATA6Q9NWH7 488 aaPredicted RBP18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 PCDHA4Q9UN74 947 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 HES2Q9Y543 173 aa18.68■□□□□ 0.58
CHCHD3-202ENST00000423635 PRR5-ARHGAP8B1AHC4 643 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 TSPAN1O60635 241 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 ERLIN2O94905 339 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 P4HBP07237 508 aaKnown RBP18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 CPA1P15085 419 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 ARHGAP8P85298 464 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 MLF2Q15773 248 aaPredicted RBP18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 NOTUMQ6P988 496 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 MTSS1LQ765P7 747 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 GRASPQ7Z6J2 395 aaPredicted RBP18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 ATRIPQ8WXE1 791 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 KCNB2Q92953 911 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 AGXT2Q9BYV1 514 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 CSRNP2Q9H175 543 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 WRAP73Q9P2S5 460 aaPredicted RBP18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 NCDNQ9UBB6 729 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 ADAM28Q9UKQ2 775 aa18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 MTF2Q9Y483 593 aaPredicted RBP18.67■□□□□ 0.58
CHCHD3-202ENST00000423635 FAM170BA6NMN3 283 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 LILRB5O75023 590 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 HNRNPA1P09651 372 aaKnown RBP eCLIP18.66■□□□□ 0.588e-6■□□□□ 8.7
CHCHD3-202ENST00000423635 RPL17P18621 184 aaKnown RBP18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 PTENP60484 403 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 CSTF1Q05048 431 aaKnown RBP18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 POU5F1BQ06416 359 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 NCBP1Q09161 790 aaKnown RBP18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 IFNLR1Q8IU57 520 aaPredicted RBP18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 C4orf19Q8IY42 314 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 FGF13Q92913 245 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 ZSCAN32Q9NX65 697 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 FBXW11Q9UKB1 542 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 VAV3Q9UKW4 847 aa18.66■□□□□ 0.58
CHCHD3-202ENST00000423635 DOCK6Q96HP0 2047 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 PFKPQ01813 784 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 MIA3Q5JRA6 1907 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 BLIDQ8IZY5 108 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 CLDN23Q96B33 292 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 FAM20AQ96MK3 541 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 NELL2Q99435 816 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 EPC1Q9H2F5 836 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 LTB4R2Q9NPC1 389 aa18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 DDX25Q9UHL0 483 aaKnown RBP18.65■□□□□ 0.58
CHCHD3-202ENST00000423635 ACACBO00763 2458 aa18.64■□□□□ 0.58
CHCHD3-202ENST00000423635 TADA2AO75478 443 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 TGM1P22735 817 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 HOXA9P31269 272 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 EVCP57679 992 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 MXD4Q14582 209 aaPredicted RBP18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 UBXN2BQ14CS0 331 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 EMC2Q15006 297 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 AMHR2Q16671 573 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 BMP2KLQ5H9B9 411 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 RTP2Q5QGT7 225 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 OTUD6AQ7L8S5 288 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 HACE1Q8IYU2 909 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 DAGLBQ8NCG7 672 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 SECISBP2LQ93073 1101 aaKnown RBP18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 CPB2Q96IY4 423 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 CLSTN3Q9BQT9 956 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 KCNMB3Q9NPA1 279 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 TDRD15B5MCY1 1934 aaKnown RBP18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 MYH15Q9Y2K3 1946 aa18.64■□□□□ 0.57
CHCHD3-202ENST00000423635 ZMYM2Q9UBW7 1377 aa18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 SLC37A4O43826 429 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms