RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 RGS16O15492 202 aaPredicted RBP16.98■□□□□ 0.31
CDH1-202ENST00000422392 PPIP5K2O43314 1243 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 RAD17O75943 681 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 RARAP10276 462 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 TRAF1Q13077 416 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 RASA3Q14644 834 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 PHLDB2Q86SQ0 1253 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 CD101Q93033 1021 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 ZNF653Q96CK0 615 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 CCDC114Q96M63 670 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 CCDC113Q9H0I3 377 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 PCYOX1Q9UHG3 505 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 GGA2Q9UJY4 613 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
CDH1-202ENST00000422392 C5orf60A6NFR6 353 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 DLATP10515 647 aaKnown RBP16.97■□□□□ 0.31
CDH1-202ENST00000422392 ADSSP30520 456 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 SOX10P56693 466 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 MRPS9P82933 396 aaKnown RBP16.97■□□□□ 0.31
CDH1-202ENST00000422392 GKAP1Q5VSY0 366 aaPredicted RBP16.97■□□□□ 0.31
CDH1-202ENST00000422392 FAM71AQ8IYT1 594 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 CHMP6Q96FZ7 201 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 DBR1Q9UK59 544 aaKnown RBP16.97■□□□□ 0.31
CDH1-202ENST00000422392 PFASO15067 1338 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
CDH1-202ENST00000422392 SNX1Q13596 522 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 ANKRD20A8PQ5CZ79 823 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 SLC13A5Q86YT5 568 aaPredicted RBP16.97■□□□□ 0.31
CDH1-202ENST00000422392 FAM129AQ9BZQ8 928 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 CD248Q9HCU0 757 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 SLC40A1Q9NP59 571 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 ZNF70Q9UC06 446 aaPredicted RBP16.97■□□□□ 0.31
CDH1-202ENST00000422392 ZNF536O15090 1300 aa16.97■□□□□ 0.31
CDH1-202ENST00000422392 CLDN3O15551 220 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 COILP38432 576 aaPredicted RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 QARSP47897 775 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 IFNAR2P48551 515 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 DRG2P55039 364 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 MYBPC2Q14324 1141 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 SIX1Q15475 284 aaPredicted RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 SNRNP35Q16560 246 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 TKFCQ3LXA3 575 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 C2CD6Q53TS8 623 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 FAM102BQ5T8I3 360 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 C1orf54Q8WWF1 131 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 CNOT10Q9H9A5 744 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 CNTNAP1P78357 1384 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 CCDC169A6NNP5 214 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 CYP11B1P15538 503 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 EIF2AK2P19525 551 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 CAP2P40123 477 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 MMP13P45452 471 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 DAB2IPQ5VWQ8 1189 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 RPS6KC1Q96S38 1066 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 PRMT1Q99873 361 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 TRIM7Q9C029 511 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 DNAJC17Q9NVM6 304 aaKnown RBP16.96■□□□□ 0.31
CDH1-202ENST00000422392 HAUS2Q9NVX0 235 aa16.96■□□□□ 0.31
CDH1-202ENST00000422392 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDH1-202ENST00000422392 FOXO6A8MYZ6 492 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 RIPK2O43353 540 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 ATP9AO75110 1047 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 ALAS1P13196 640 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 HSD17B4P51659 736 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 GTF2BQ00403 316 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 LLGL2Q6P1M3 1020 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 C3orf20Q8ND61 904 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 PGM2Q96G03 612 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 ZNF317Q96PQ6 595 aaPredicted RBP16.95■□□□□ 0.3
CDH1-202ENST00000422392 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 DDX23Q9BUQ8 820 aaKnown RBP16.95■□□□□ 0.3
CDH1-202ENST00000422392 WNT8AQ9H1J5 351 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 AGO4Q9HCK5 861 aaKnown RBP16.95■□□□□ 0.3
CDH1-202ENST00000422392 KLC4Q9NSK0 619 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 MTRF1LQ9UGC7 380 aaKnown RBP16.95■□□□□ 0.3
CDH1-202ENST00000422392 ASTN2O75129 1339 aaPredicted RBP16.95■□□□□ 0.3
CDH1-202ENST00000422392 PODXLO00592 558 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 C21orf2O43822 256 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 GZMAP12544 262 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 MTMR1Q13613 665 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 RNF207Q6ZRF8 634 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 TAS1R2Q8TE23 839 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 SHC3Q92529 594 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 SYNPO2Q9UMS6 1093 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 WDR81Q562E7 1941 aa16.95■□□□□ 0.3
CDH1-202ENST00000422392 P4HA2O15460 535 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 RASSF9O75901 435 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 MYCLP12524 364 aaPredicted RBP16.94■□□□□ 0.3
CDH1-202ENST00000422392 SMTNP53814 917 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 LONRF1Q17RB8 773 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 OTUD6AQ7L8S5 288 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 LRRC34Q8IZ02 419 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 FAM151AQ8WW52 585 aa16.94■□□□□ 0.3
CDH1-202ENST00000422392 CLEC4DQ8WXI8 215 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms