RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 ZBTB8OSQ8IWT0 167 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 TMEM130Q8N3G9 435 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 POMGNT1Q8WZA1 660 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 SENP6Q9GZR1 1112 aaPredicted RBP9.78□□□□□ -0.84
HPS4-204ENST00000422379 C2orf40Q9H1Z8 148 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 TMX1Q9H3N1 280 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 PDZD7Q9H5P4 517 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 AGO3Q9H9G7 860 aaKnown RBP9.78□□□□□ -0.84
HPS4-204ENST00000422379 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
HPS4-204ENST00000422379 LAMA3Q16787 3333 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 PTPRJQ12913 1337 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 A0A0U1RQG5 324 aaPredicted RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 LGALS16A8MUM7 142 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 SLC16A3O15427 465 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 EXOC3O60645 756 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 TRIM49P0CI25 452 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 TRIM49CP0CI26 452 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 EIF4BP23588 611 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 THPOP40225 353 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 KCNJ6P48051 423 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 GJA8P48165 433 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 MRPS6P82932 125 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 APBA1Q02410 837 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 SPAG1Q07617 926 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 PRPF4BQ13523 1007 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 PKN2Q16513 984 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 ATF7IP2Q5U623 682 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 E4F1Q66K89 784 aaPredicted RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 ZPBP2Q6X784 338 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 RPAINQ86UA6 219 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 FAM228AQ86W67 206 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 FAM126BQ8IXS8 530 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 FAM186BQ8IYM0 893 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 CCAR2Q8N163 923 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 XXYLT1Q8NBI6 393 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 CCDC112Q8NEF3 446 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 GOLGA5Q8TBA6 731 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 SLC35C1Q96A29 364 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 SCLT1Q96NL6 688 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 FAM213AQ9BRX8 229 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 MRPL4Q9BYD3 311 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 CELF4Q9BZC1 486 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 MCOLN1Q9GZU1 580 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 CDT1Q9H211 546 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 CXCL16Q9H2A7 254 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 TOPORSQ9NS56 1045 aaPredicted RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 KCND1Q9NSA2 647 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 EXOC7Q9UPT5 735 aa9.77□□□□□ -0.85
HPS4-204ENST00000422379 NOC2LQ9Y3T9 749 aaKnown RBP9.77□□□□□ -0.85
HPS4-204ENST00000422379 UMODL1Q5DID0 1318 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 RNF225M0QZC1 329 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 NRDCO43847 1150 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 LRRN2O75325 713 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 TOM1L1O75674 476 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 CD4P01730 458 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 TFRCP02786 760 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 HARSP12081 509 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 GARTP22102 1010 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 RPL13P26373 211 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 MTIF2P46199 727 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 CRYBB1P53674 252 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 MCL1Q07820 350 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 PTK7Q13308 1070 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 MYBPC2Q14324 1141 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 GPNMBQ14956 572 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 SNRNP35Q16560 246 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 CCDC40Q4G0X9 1142 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 FILIP1LQ4L180 1135 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 ZNF618Q5T7W0 954 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 SRGAP1Q7Z6B7 1085 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 FRMD5Q7Z6J6 570 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 TMEM139Q8IV31 216 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 TC2NQ8N9U0 490 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 POP1Q99575 1024 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 PRMT7Q9NVM4 692 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 TRMT1Q9NXH9 659 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 ARMCX3Q9UH62 379 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 KCNG1Q9UIX4 513 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 AGO2Q9UKV8 859 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 A0A1B0GUA9 196 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 N4BP3O15049 544 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 EPHB6O15197 1021 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 CKBP12277 381 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 PSMC2P35998 433 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 MCCD1P59942 119 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 SNRPFP62306 86 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 PTPN11Q06124 597 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 PPP3CAQ08209 521 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 CBWD6Q4V339 395 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 VWA3BQ502W6 1294 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 CBWD3Q5JTY5 395 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 CBWD5Q5RIA9 395 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 DPY19L2P1Q6NXN4 242 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 NME8Q8N427 588 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 PRIMPOLQ96LW4 560 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 MKNK1Q9BUB5 465 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 MSTO1Q9BUK6 570 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 NOC4LQ9BVI4 516 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 EIF2AQ9BY44 585 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms