RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 EIF2AK1Q9BQI3 630 aaKnown RBP22.81■■□□□ 1.24
USP48-205ENST00000421625 DNAJC18Q9H819 358 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 UFL1O94874 794 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 DLATP10515 647 aaKnown RBP22.81■■□□□ 1.24
USP48-205ENST00000421625 BRAFP15056 766 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 RNF207Q6ZRF8 634 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 CYP4X1Q8N118 509 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 CD101Q93033 1021 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 VAV3Q9UKW4 847 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 MTUS1Q9ULD2 1270 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.8■■□□□ 1.24
USP48-205ENST00000421625 MSH4O15457 936 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 ECEL1O95672 775 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 ECHDC2Q86YB7 292 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 C1orf54Q8WWF1 131 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 UTP4Q969X6 686 aaKnown RBP22.8■■□□□ 1.24
USP48-205ENST00000421625 FAM163AQ96GL9 167 aaPredicted RBP22.8■■□□□ 1.24
USP48-205ENST00000421625 UBE2TQ9NPD8 197 aaPredicted RBP22.8■■□□□ 1.24
USP48-205ENST00000421625 EME2A4GXA9 379 aaPredicted RBP22.8■■□□□ 1.24
USP48-205ENST00000421625 EIF3DO15371 548 aaKnown RBP eCLIP22.8■■□□□ 1.24
USP48-205ENST00000421625 SNX1Q13596 522 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 MOXD1Q6UVY6 613 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 ARHGEF19Q8IW93 802 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 ARMC2Q8NEN0 867 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 LMO3Q8TAP4 145 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 ZNF483Q8TF39 744 aaPredicted RBP22.8■■□□□ 1.24
USP48-205ENST00000421625 RPS6KC1Q96S38 1066 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 PCDHB18PQ96TA0 734 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 MKNK1Q9BUB5 465 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 TBK1Q9UHD2 729 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 FRMD4BQ9Y2L6 1034 aa22.8■■□□□ 1.24
USP48-205ENST00000421625 GAP43P17677 238 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 SHMT1P34896 483 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 PDE6BP35913 854 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 KRT17Q04695 432 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 KYNUQ16719 465 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 Q4G0T1 1027 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 PWWP2AQ96N64 755 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 ETNK1Q9HBU6 452 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 AGPAT3Q9NRZ7 376 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 NKX1-2Q9UD57 310 aaPredicted RBP22.79■■□□□ 1.24
USP48-205ENST00000421625 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.79■■□□□ 1.24
USP48-205ENST00000421625 CCNB1P14635 433 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 STX2P32856 288 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 WNT8AQ9H1J5 351 aa22.79■■□□□ 1.24
USP48-205ENST00000421625 SPOPO43791 374 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 CETPP11597 493 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 SLC17A8Q8NDX2 589 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.78■■□□□ 1.241e-8■■■■■ 50.8
USP48-205ENST00000421625 KLHL14Q9P2G3 628 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 SERPINB13Q9UIV8 391 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 TBX3O15119 743 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 CLDN3O15551 220 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 UPP2O95045 317 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 DLG4P78352 724 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 BLMHQ13867 455 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 TAF11Q15544 211 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 TRIP13Q15645 432 aaPredicted RBP22.78■■□□□ 1.24
USP48-205ENST00000421625 FIZ1Q96SL8 496 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 GLT8D2Q9H1C3 349 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 ACP6Q9NPH0 428 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 ASIC3Q9UHC3 531 aa22.78■■□□□ 1.24
USP48-205ENST00000421625 CHRNB2P17787 502 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 NFIL3Q16649 462 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 PLCD4Q9BRC7 762 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 DMAC2Q9NW81 257 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 ONECUT3O60422 494 aaPredicted RBP22.77■■□□□ 1.24
USP48-205ENST00000421625 UNC5CO95185 931 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 IL1R1P14778 569 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 BFSP1Q12934 665 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 AP3B2Q13367 1082 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 SHROOM1Q2M3G4 852 aaPredicted RBP22.77■■□□□ 1.24
USP48-205ENST00000421625 RHBDF2Q6PJF5 856 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 FAM47EQ6ZV65 393 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 HS2ST1Q7LGA3 356 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 KAT5Q92993 513 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 TRIM7Q9C029 511 aa22.77■■□□□ 1.24
USP48-205ENST00000421625 CORO1CQ9ULV4 474 aaPredicted RBP22.77■■□□□ 1.24
USP48-205ENST00000421625 ATP5DP30049 168 aa22.77■■□□□ 1.23
USP48-205ENST00000421625 FOXN2P32314 431 aa22.77■■□□□ 1.23
USP48-205ENST00000421625 USH1GQ495M9 461 aa22.77■■□□□ 1.23
USP48-205ENST00000421625 RNF43Q68DV7 783 aa22.77■■□□□ 1.23
USP48-205ENST00000421625 C1orf186Q6ZWK4 172 aa22.77■■□□□ 1.23
USP48-205ENST00000421625 TPH2Q8IWU9 490 aa22.77■■□□□ 1.23
USP48-205ENST00000421625 SRRM1Q8IYB3 904 aaKnown RBP22.77■■□□□ 1.23
USP48-205ENST00000421625 PARVGQ9HBI0 331 aa22.77■■□□□ 1.23
USP48-205ENST00000421625 FOCADQ5VW36 1801 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 SGPL1O95470 568 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 TTC4O95801 387 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 RNASELQ05823 741 aaKnown RBP22.76■■□□□ 1.23
USP48-205ENST00000421625 C15orf52Q6ZUT6 534 aaKnown RBP22.76■■□□□ 1.23
USP48-205ENST00000421625 SLF2Q8IX21 1173 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 C12orf50Q8NA57 414 aaPredicted RBP22.76■■□□□ 1.23
USP48-205ENST00000421625 ATG4AQ8WYN0 398 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 FAM20AQ96MK3 541 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 POLR3CQ9BUI4 534 aaPredicted RBP22.76■■□□□ 1.23
USP48-205ENST00000421625 ENO4A6NNW6 628 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 EXOC3O60645 756 aa22.76■■□□□ 1.23
USP48-205ENST00000421625 BCRP11274 1271 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms