RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 DCNP07585 359 aaKnown RBP9.02□□□□□ -0.97
VIM-202ENST00000421459 ARF4P18085 180 aaPredicted RBP9.02□□□□□ -0.97
VIM-202ENST00000421459 GLRA2P23416 452 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 GLUD2P49448 558 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 DSG1Q02413 1049 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 GALNT17Q6IS24 598 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 PRSS55Q6UWB4 352 aaPredicted RBP9.02□□□□□ -0.97
VIM-202ENST00000421459 C15orf39Q6ZRI6 1047 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 OTUD6AQ7L8S5 288 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 NECAB1Q8N987 351 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 GPR152Q8TDT2 470 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 TCP11Q8WWU5 503 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 NT5C3AQ9H0P0 336 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 ZSWIM4Q9H7M6 989 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 GPRC5CQ9NQ84 441 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 CHST7Q9NS84 486 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 PARP2Q9UGN5 583 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 R4GN57 208 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 CLUHO75153 1309 aa9.02□□□□□ -0.97
VIM-202ENST00000421459 ASAP2O43150 1006 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 ADAM12O43184 909 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 DKC1O60832 514 aaKnown RBP eCLIP9.01□□□□□ -0.97
VIM-202ENST00000421459 LARGE1O95461 756 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 FDPSP14324 419 aaKnown RBP9.01□□□□□ -0.97
VIM-202ENST00000421459 ARL2P36404 184 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 RTP2Q5QGT7 225 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 FUT10Q6P4F1 479 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 NOTUMQ6P988 496 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 LILRA6Q6PI73 481 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 CPLX2Q6PUV4 134 aaKnown RBP9.01□□□□□ -0.97
VIM-202ENST00000421459 GET4Q7L5D6 327 aaPredicted RBP9.01□□□□□ -0.97
VIM-202ENST00000421459 CMASQ8NFW8 434 aaPredicted RBP9.01□□□□□ -0.97
VIM-202ENST00000421459 RSPH1Q8WYR4 309 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 TNFRSF25Q93038 417 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 HSD17B14Q9BPX1 270 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 COLEC11Q9BWP8 271 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 TM6SF1Q9BZW5 370 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 TBC1D17Q9HA65 648 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 PIDD1Q9HB75 910 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 POLD4Q9HCU8 107 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 UBN1Q9NPG3 1134 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 IGSF9Q9P2J2 1179 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 EPS15L1Q9UBC2 864 aa9.01□□□□□ -0.97
VIM-202ENST00000421459 MYO10Q9HD67 2058 aa9□□□□□ -0.97
VIM-202ENST00000421459 WDR81Q562E7 1941 aa9□□□□□ -0.97
VIM-202ENST00000421459 CARNS1A5YM72 827 aa9□□□□□ -0.97
VIM-202ENST00000421459 CASTOR2A6NHX0 329 aa9□□□□□ -0.97
VIM-202ENST00000421459 POTEMA6NI47 508 aa9□□□□□ -0.97
VIM-202ENST00000421459 TBX3O15119 743 aa9□□□□□ -0.97
VIM-202ENST00000421459 USO1O60763 962 aaKnown RBP9□□□□□ -0.97
VIM-202ENST00000421459 PFKFB2O60825 505 aa9□□□□□ -0.97
VIM-202ENST00000421459 EDN1P05305 212 aa9□□□□□ -0.97
VIM-202ENST00000421459 LAMP2P13473 410 aa9□□□□□ -0.97
VIM-202ENST00000421459 GLULP15104 373 aa9□□□□□ -0.97
VIM-202ENST00000421459 GCFC2P16383 781 aaKnown RBP9□□□□□ -0.97
VIM-202ENST00000421459 AXLP30530 894 aa9□□□□□ -0.97
VIM-202ENST00000421459 TXKP42681 527 aa9□□□□□ -0.97
VIM-202ENST00000421459 RARRES1P49788 294 aa9□□□□□ -0.97
VIM-202ENST00000421459 PARM1Q6UWI2 310 aa9□□□□□ -0.97
VIM-202ENST00000421459 GRASPQ7Z6J2 395 aaPredicted RBP9□□□□□ -0.97
VIM-202ENST00000421459 EXOC8Q8IYI6 725 aa9□□□□□ -0.97
VIM-202ENST00000421459 CNNM3Q8NE01 707 aa9□□□□□ -0.97
VIM-202ENST00000421459 KCNG4Q8TDN1 519 aa9□□□□□ -0.97
VIM-202ENST00000421459 RTP3Q9BQQ7 232 aa9□□□□□ -0.97
VIM-202ENST00000421459 FOXQ1Q9C009 403 aa9□□□□□ -0.97
VIM-202ENST00000421459 TRIM6Q9C030 488 aaPredicted RBP9□□□□□ -0.97
VIM-202ENST00000421459 POLR3FQ9H1D9 316 aaPredicted RBP9□□□□□ -0.97
VIM-202ENST00000421459 ORC3Q9UBD5 711 aaPredicted RBP9□□□□□ -0.97
VIM-202ENST00000421459 WNT16Q9UBV4 365 aa9□□□□□ -0.97
VIM-202ENST00000421459 ADAM28Q9UKQ2 775 aa9□□□□□ -0.97
VIM-202ENST00000421459 PCDHA12Q9UN75 941 aa9□□□□□ -0.97
VIM-202ENST00000421459 GIT1Q9Y2X7 761 aa9□□□□□ -0.97
VIM-202ENST00000421459 PPME1Q9Y570 386 aa9□□□□□ -0.97
VIM-202ENST00000421459 NUMBLQ9Y6R0 609 aa9□□□□□ -0.97
VIM-202ENST00000421459 COL4A3Q01955 1670 aa9□□□□□ -0.97
VIM-202ENST00000421459 BTBD18B2RXH4 712 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 CCL16O15467 120 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 JAK2O60674 1132 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 TADA2AO75478 443 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 KIF4AO95239 1232 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 BAG4O95429 457 aaKnown RBP8.99□□□□□ -0.97
VIM-202ENST00000421459 SRFP11831 508 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 LIG1P18858 919 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 ATP2B1P20020 1258 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 RFX1P22670 979 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 KRT2P35908 639 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 ID4P47928 161 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 GPC5P78333 572 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 HTR4Q13639 388 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 TFDP1Q14186 410 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 MXD4Q14582 209 aaPredicted RBP8.99□□□□□ -0.97
VIM-202ENST00000421459 CALCRLQ16602 461 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 USP41Q3LFD5 358 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 SLC27A1Q6PCB7 646 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 POTEHQ6S545 545 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 CEP57Q86XR8 500 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 IFNLR1Q8IU57 520 aaPredicted RBP8.99□□□□□ -0.97
VIM-202ENST00000421459 DCLK2Q8N568 766 aa8.99□□□□□ -0.97
VIM-202ENST00000421459 BSNDQ8WZ55 320 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms